Strain Fitness in Erwinia amylovora T8 around OLJFJH_16055

Experiment: Matrix:KB soft agar;Phage:inactivated cocktail;Temp:28;Samp:31-1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Matrix:KB soft agar;Phage:inactivated cocktail;Temp:28;Samp:31-1
3,381,137	-		OLJFJH_16045	0.81	-2.7
3,381,279	-				-2.2
3,381,325	+				-2.9
3,381,326	-				-1.6
3,381,326	-				-3.1
3,381,326	-				-3.5
3,381,328	+				-3.0
3,381,328	+				-1.7
3,381,329	-				-2.5
3,381,331	-				-1.8
3,381,331	-				-2.8
3,381,331	-				-1.3
3,381,331	-				-3.3
3,381,365	+				-0.3
3,381,366	-				+0.0
3,381,416	+				-1.9
3,381,436	+				-0.9
3,381,487	+				-0.3
3,381,558	-		OLJFJH_16050	0.15	-0.8
3,381,558	-		OLJFJH_16050	0.15	-0.2
3,381,558	-		OLJFJH_16050	0.15	+0.3
3,381,667	+		OLJFJH_16050	0.32	-0.9
3,381,685	+		OLJFJH_16050	0.35	-0.4
3,381,743	+		OLJFJH_16050	0.44	-0.5
3,381,743	+		OLJFJH_16050	0.44	+0.1
3,381,744	-		OLJFJH_16050	0.44	+0.4
3,381,744	-		OLJFJH_16050	0.44	+0.2
3,381,744	-		OLJFJH_16050	0.44	-1.0
3,381,744	-		OLJFJH_16050	0.44	-0.1
3,381,879	+		OLJFJH_16050	0.66	-0.5
3,381,880	-		OLJFJH_16050	0.66	-0.9
3,382,086	+				-1.0
3,382,087	-				+0.1
3,382,093	+				+0.1
3,382,094	-				+0.3
3,382,096	+				+0.3
3,382,096	+				-1.2
3,382,097	-				-1.1
3,382,097	-				-0.3
3,382,138	+				-1.0
3,382,198	-		OLJFJH_16055	0.11	-2.8
3,382,499	+		OLJFJH_16055	0.66	-1.8
3,382,533	-		OLJFJH_16055	0.72	-2.1
3,382,618	-		OLJFJH_16055	0.88	-3.5
3,382,680	-				-3.5
3,382,693	+				-0.4
3,382,697	-				-0.9
3,382,726	-				-0.6
3,382,726	-				-0.6
3,382,727	+				-1.3
3,382,728	-				+0.0
3,382,728	-				-0.5
3,382,827	-				+1.0
3,382,919	+				+0.8
3,382,925	+				+0.6
3,382,932	-				+0.7
3,382,935	+				+2.7
3,382,985	+				+1.8
3,382,986	-				+0.9
3,382,986	-				+1.7
3,383,097	+		OLJFJH_16060	0.13	+2.3
3,383,192	+		OLJFJH_16060	0.18	+0.7
3,383,192	+		OLJFJH_16060	0.18	+1.8
3,383,192	+		OLJFJH_16060	0.18	+2.9
3,383,192	+		OLJFJH_16060	0.18	-0.9
3,383,193	-		OLJFJH_16060	0.18	+1.4
3,383,193	-		OLJFJH_16060	0.18	+1.3
3,383,197	-		OLJFJH_16060	0.18	+2.0
3,383,295	+		OLJFJH_16060	0.23	+0.7
3,383,358	+		OLJFJH_16060	0.27	+1.1
3,383,359	-		OLJFJH_16060	0.27	+1.1
3,383,372	+		OLJFJH_16060	0.27	+1.2
3,383,373	-		OLJFJH_16060	0.28	+1.1
3,383,373	-		OLJFJH_16060	0.28	+1.1
3,383,378	+		OLJFJH_16060	0.28	+2.3
3,383,378	+		OLJFJH_16060	0.28	-0.7
3,383,379	-		OLJFJH_16060	0.28	+0.7
3,383,379	-		OLJFJH_16060	0.28	+0.8
3,383,530	+		OLJFJH_16060	0.36	+2.7
3,383,530	+		OLJFJH_16060	0.36	+1.6
3,383,531	-		OLJFJH_16060	0.36	+1.2
3,383,598	+		OLJFJH_16060	0.40	+2.2
3,383,598	+		OLJFJH_16060	0.40	+1.6
3,383,598	+		OLJFJH_16060	0.40	+0.2
3,383,628	+		OLJFJH_16060	0.41	+1.2
3,383,629	-		OLJFJH_16060	0.41	+1.3
3,383,633	-		OLJFJH_16060	0.42	+1.5