Strain Fitness in Erwinia amylovora T8 around OLJFJH_12195

Experiment: Matrix:KB soft agar;Phage:inactivated cocktail;Temp:28;Samp:31-1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Matrix:KB soft agar;Phage:inactivated cocktail;Temp:28;Samp:31-1
2,567,751	+		OLJFJH_12190	0.56	-0.3
2,567,755	+		OLJFJH_12190	0.56	-0.3
2,567,756	-		OLJFJH_12190	0.56	+0.1
2,567,756	-		OLJFJH_12190	0.56	-0.2
2,567,756	-		OLJFJH_12190	0.56	-0.5
2,567,756	-		OLJFJH_12190	0.56	-0.3
2,567,917	+		OLJFJH_12190	0.76	+0.1
2,567,918	-		OLJFJH_12190	0.76	-0.7
2,567,918	-		OLJFJH_12190	0.76	-0.1
2,567,921	+		OLJFJH_12190	0.76	-0.1
2,567,922	-		OLJFJH_12190	0.76	+0.4
2,568,161	+				-2.0
2,568,161	+				-0.5
2,568,162	-				+0.4
2,568,162	-				-1.1
2,568,201	-				+1.2
2,568,202	+				-1.0
2,568,203	-				-0.4
2,568,220	+				+0.2
2,568,223	+				+0.2
2,568,223	+				-1.2
2,568,224	-				-1.8
2,568,224	-				-1.3
2,568,224	-				-1.7
2,568,250	-				-1.8
2,568,260	+				-2.4
2,568,324	+				-1.2
2,568,324	+				-0.5
2,568,324	+				-0.7
2,568,324	+				-0.4
2,568,325	-				-1.9
2,568,328	+				-0.2
2,568,329	-				-1.2
2,568,329	-				-2.1
2,568,329	-				-3.2
2,568,390	+				-0.7
2,568,391	-				-1.5
2,568,404	-				-0.9
2,568,404	-				-1.3
2,568,430	+				-0.4
2,568,444	+				-0.0
2,568,444	+				-0.7
2,568,451	+				-0.4
2,568,452	-				-2.3
2,568,550	+				+0.6
2,568,568	+				-2.4
2,568,568	+				-3.0
2,568,568	+				-0.5
2,568,568	+				-2.1
2,568,568	+				-3.4
2,568,568	+				-1.7
2,568,569	-				-2.0
2,568,570	+				-2.2
2,568,596	+				-1.2
2,568,756	+				-3.1
2,568,756	+				+0.3
2,568,757	-				-3.0
2,568,757	-				-3.2
2,568,757	-				-1.1
2,568,757	-				-3.0
2,568,758	+				-3.8
2,568,758	+				-0.5
2,568,758	+				-2.6
2,568,758	+				-1.7
2,568,759	-				-2.8
2,568,759	-				-1.9
2,568,782	+				-2.9
2,568,783	-				-1.7
2,568,831	+		OLJFJH_12195	0.12	-1.8
2,568,916	-		OLJFJH_12195	0.18	-2.6
2,568,917	+		OLJFJH_12195	0.19	-1.7
2,568,917	+		OLJFJH_12195	0.19	-1.8
2,568,917	+		OLJFJH_12195	0.19	-1.8
2,568,917	+		OLJFJH_12195	0.19	-1.7
2,568,918	-		OLJFJH_12195	0.19	-2.2
2,568,918	-		OLJFJH_12195	0.19	-0.4
2,568,918	-		OLJFJH_12195	0.19	+0.3
2,568,921	+		OLJFJH_12195	0.19	-2.6
2,568,921	+		OLJFJH_12195	0.19	-1.5
2,568,921	+		OLJFJH_12195	0.19	-1.8
2,568,921	+		OLJFJH_12195	0.19	-2.3
2,568,921	+		OLJFJH_12195	0.19	-2.7
2,568,922	-		OLJFJH_12195	0.19	-3.4
2,568,956	+		OLJFJH_12195	0.21	-2.1
2,568,957	-		OLJFJH_12195	0.21	-3.8
2,568,993	-		OLJFJH_12195	0.24	-2.3
2,569,024	+		OLJFJH_12195	0.26	-4.5
2,569,115	+		OLJFJH_12195	0.33	-1.6
2,569,115	+		OLJFJH_12195	0.33	-2.3
2,569,175	+		OLJFJH_12195	0.37	-0.8
2,569,176	-		OLJFJH_12195	0.38	-1.8
2,569,176	-		OLJFJH_12195	0.38	-2.3
2,569,214	-		OLJFJH_12195	0.40	-0.1
2,569,238	+		OLJFJH_12195	0.42	-2.0
2,569,294	+		OLJFJH_12195	0.46	-2.0
2,569,294	+		OLJFJH_12195	0.46	-1.3
2,569,503	+		OLJFJH_12195	0.61	-3.5
2,569,605	+		OLJFJH_12195	0.69	-2.2
2,569,605	+		OLJFJH_12195	0.69	-3.0
2,569,606	-		OLJFJH_12195	0.69	-1.7
2,569,606	-		OLJFJH_12195	0.69	-2.8
2,569,606	-		OLJFJH_12195	0.69	-1.9
2,569,606	-		OLJFJH_12195	0.69	-3.1
2,569,606	-		OLJFJH_12195	0.69	-1.1
2,569,651	-		OLJFJH_12195	0.72	-0.3
2,569,779	-		OLJFJH_12195	0.82	-1.6
2,569,779	-		OLJFJH_12195	0.82	-2.2
2,569,832	+		OLJFJH_12195	0.85	-2.5
2,569,832	+		OLJFJH_12195	0.85	-2.7
2,569,832	+		OLJFJH_12195	0.85	-1.6
2,569,833	-		OLJFJH_12195	0.86	-2.7
2,570,028	+				-0.3
2,570,028	+				-0.8
2,570,029	-				-0.3
2,570,143	+				+0.2
2,570,144	-				-0.0
2,570,145	+				-0.4
2,570,146	-				-0.4
2,570,146	-				-0.0
2,570,193	+				+0.1
2,570,226	+				-0.9
2,570,314	+		OLJFJH_12200	0.13	+0.9
2,570,315	-		OLJFJH_12200	0.13	+0.2
2,570,315	-		OLJFJH_12200	0.13	+0.2
2,570,347	+		OLJFJH_12200	0.16	-0.4
2,570,451	+		OLJFJH_12200	0.23	+0.6
2,570,452	-		OLJFJH_12200	0.23	+0.2
2,570,452	-		OLJFJH_12200	0.23	-0.8
2,570,482	+		OLJFJH_12200	0.25	-0.8
2,570,483	-		OLJFJH_12200	0.25	-0.2
2,570,614	+		OLJFJH_12200	0.34	+0.9
2,570,615	-		OLJFJH_12200	0.34	-0.5
2,570,641	+		OLJFJH_12200	0.36	+0.2
2,570,641	+		OLJFJH_12200	0.36	-0.4
2,570,642	-		OLJFJH_12200	0.36	+0.8
2,570,648	-		OLJFJH_12200	0.37	-2.8
2,570,648	-		OLJFJH_12200	0.37	-1.5
2,570,703	+		OLJFJH_12200	0.41	+0.1
2,570,703	+		OLJFJH_12200	0.41	+0.2
2,570,704	-		OLJFJH_12200	0.41	+0.1
2,570,704	-		OLJFJH_12200	0.41	-0.2
2,570,704	-		OLJFJH_12200	0.41	+0.6
2,570,753	-		OLJFJH_12200	0.44	-0.8
2,570,860	+		OLJFJH_12200	0.52	-0.1
2,570,861	-		OLJFJH_12200	0.52	-0.1
2,570,885	+		OLJFJH_12200	0.53	+0.1
2,570,886	-		OLJFJH_12200	0.53	+0.0
2,570,918	-		OLJFJH_12200	0.56	-0.1
2,570,991	+		OLJFJH_12200	0.61	+1.2
2,570,992	-		OLJFJH_12200	0.61	-0.1