Strain Fitness in Erwinia amylovora T8 around OLJFJH_11420

Experiment: Matrix:KB soft agar;Phage:inactivated cocktail;Temp:28;Samp:31-1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Matrix:KB soft agar;Phage:inactivated cocktail;Temp:28;Samp:31-1
2,380,559	+		OLJFJH_11410	0.57	+0.3
2,380,650	-		OLJFJH_11410	0.78	+0.7
2,380,714	+				-1.2
2,380,714	+				-0.5
2,380,714	+				-0.4
2,380,772	-				-0.4
2,380,772	-				-0.8
2,380,788	-				-0.9
2,380,876	+		OLJFJH_11415	0.16	-0.5
2,380,878	+		OLJFJH_11415	0.17	-1.0
2,380,890	-		OLJFJH_11415	0.19	-0.1
2,380,890	-		OLJFJH_11415	0.19	-0.9
2,380,890	-		OLJFJH_11415	0.19	-2.6
2,380,890	-		OLJFJH_11415	0.19	-1.6
2,380,948	-		OLJFJH_11415	0.27	-1.0
2,380,969	+		OLJFJH_11415	0.30	+0.9
2,380,969	+		OLJFJH_11415	0.30	-3.1
2,380,970	-		OLJFJH_11415	0.30	-1.7
2,380,992	+		OLJFJH_11415	0.34	-1.8
2,381,062	-		OLJFJH_11415	0.44	-2.1
2,381,182	+		OLJFJH_11415	0.62	-2.1
2,381,182	+		OLJFJH_11415	0.62	-2.1
2,381,182	+		OLJFJH_11415	0.62	-1.9
2,381,182	+		OLJFJH_11415	0.62	-1.3
2,381,182	+		OLJFJH_11415	0.62	-1.7
2,381,183	-		OLJFJH_11415	0.62	-1.3
2,381,183	-		OLJFJH_11415	0.62	-1.1
2,381,183	-		OLJFJH_11415	0.62	-0.9
2,381,191	+		OLJFJH_11415	0.63	-1.7
2,381,191	+		OLJFJH_11415	0.63	-0.4
2,381,192	-		OLJFJH_11415	0.63	+0.9
2,381,192	-		OLJFJH_11415	0.63	-2.3
2,381,192	-		OLJFJH_11415	0.63	-1.1
2,381,192	-		OLJFJH_11415	0.63	+0.6
2,381,236	+		OLJFJH_11415	0.70	+0.3
2,381,236	+		OLJFJH_11415	0.70	-0.8
2,381,236	+		OLJFJH_11415	0.70	-0.7
2,381,236	+		OLJFJH_11415	0.70	-1.5
2,381,236	+		OLJFJH_11415	0.70	-0.9
2,381,236	+		OLJFJH_11415	0.70	-2.0
2,381,237	-		OLJFJH_11415	0.70	-3.3
2,381,237	-		OLJFJH_11415	0.70	-1.1
2,381,237	-		OLJFJH_11415	0.70	+0.9
2,381,237	-		OLJFJH_11415	0.70	-0.7
2,381,238	+		OLJFJH_11415	0.70	-1.1
2,381,269	+		OLJFJH_11415	0.75	-1.3
2,381,269	+		OLJFJH_11415	0.75	-2.0
2,381,269	+		OLJFJH_11415	0.75	-1.3
2,381,270	-		OLJFJH_11415	0.75	-1.3
2,381,270	-		OLJFJH_11415	0.75	-1.6
2,381,270	-		OLJFJH_11415	0.75	-0.9
2,381,272	-		OLJFJH_11415	0.75	-0.1
2,381,291	+		OLJFJH_11415	0.78	-1.8
2,381,291	+		OLJFJH_11415	0.78	-1.3
2,381,291	+		OLJFJH_11415	0.78	-2.0
2,381,325	-		OLJFJH_11415	0.83	-1.1
2,381,353	+		OLJFJH_11415	0.87	-0.7
2,381,400	+				-1.8
2,381,437	+				-0.6
2,381,451	-				-1.9
2,381,489	+				-0.5
2,381,489	+				-1.4
2,381,490	-				-2.0
2,381,490	-				-3.0
2,381,490	-				-1.0
2,381,490	-				-2.2
2,381,490	-				-0.8
2,381,490	-				-1.1
2,381,557	+				-2.9
2,381,766	-		OLJFJH_11420	0.12	-0.4
2,381,999	-		OLJFJH_11420	0.24	+1.9
2,382,029	-		OLJFJH_11420	0.26	-1.5
2,382,199	+		OLJFJH_11420	0.36	-2.4
2,382,199	+		OLJFJH_11420	0.36	-0.0
2,382,199	+		OLJFJH_11420	0.36	-1.1
2,382,200	-		OLJFJH_11420	0.36	-2.7
2,382,200	-		OLJFJH_11420	0.36	-2.1
2,382,259	-		OLJFJH_11420	0.39	-2.0
2,382,356	+		OLJFJH_11420	0.44	-1.8
2,382,356	+		OLJFJH_11420	0.44	-1.0
2,382,357	-		OLJFJH_11420	0.44	-0.1
2,382,357	-		OLJFJH_11420	0.44	-1.7
2,382,357	-		OLJFJH_11420	0.44	-3.6
2,382,383	+		OLJFJH_11420	0.46	-1.1
2,382,384	-		OLJFJH_11420	0.46	+0.3
2,382,413	+		OLJFJH_11420	0.47	-0.9
2,382,413	+		OLJFJH_11420	0.47	-1.9
2,382,519	-		OLJFJH_11420	0.53	-2.1
2,382,519	-		OLJFJH_11420	0.53	-0.6
2,382,734	+		OLJFJH_11420	0.65	-2.4
2,382,734	+		OLJFJH_11420	0.65	-2.1
2,382,734	+		OLJFJH_11420	0.65	-0.4
2,382,871	+		OLJFJH_11420	0.73	-1.7
2,382,872	-		OLJFJH_11420	0.73	+0.9
2,382,944	+		OLJFJH_11420	0.77	-0.1
2,382,986	-		OLJFJH_11420	0.79	-0.4
2,383,087	+		OLJFJH_11420	0.85	-1.6
2,383,190	+				-1.3
2,383,190	+				-2.3
2,383,191	-				-1.9
2,383,191	-				-0.7
2,383,193	+				-2.5
2,383,193	+				-2.2
2,383,240	+				-3.1
2,383,241	-				-1.7
2,383,311	+				-2.1
2,383,311	+				-1.3
2,383,312	-				-0.7
2,383,312	-				-0.4
2,383,312	-				-3.9
2,383,312	-				-1.3
2,383,314	-				-2.6
2,383,314	-				-0.7
2,383,314	-				-1.9
2,383,322	-				-2.2
2,383,322	-				-2.0
2,383,337	-				+0.7
2,383,359	+				-0.7
2,383,359	+				-1.4
2,383,360	-				-2.1
2,383,360	-				-0.3
2,383,360	-				-1.5
2,383,360	-				+0.6
2,383,360	-				-2.6
2,383,460	-		OLJFJH_11425	0.19	+0.9
2,383,460	-		OLJFJH_11425	0.19	+0.1
2,383,818	+		OLJFJH_11425	0.89	-1.4
2,383,819	-		OLJFJH_11425	0.89	-1.7
2,383,846	-				-0.4
2,383,857	-				-0.5
2,383,965	-				-1.1
2,384,033	-		OLJFJH_11430	0.12	+0.1
2,384,138	+		OLJFJH_11430	0.20	-1.5
2,384,139	-		OLJFJH_11430	0.20	-0.7
2,384,139	-		OLJFJH_11430	0.20	-1.1
2,384,166	+		OLJFJH_11430	0.22	-2.9
2,384,166	+		OLJFJH_11430	0.22	+0.9
2,384,166	+		OLJFJH_11430	0.22	-0.6
2,384,166	+		OLJFJH_11430	0.22	-0.8
2,384,166	+		OLJFJH_11430	0.22	-1.0
2,384,167	-		OLJFJH_11430	0.22	-1.1
2,384,169	-		OLJFJH_11430	0.22	-0.5
2,384,169	-		OLJFJH_11430	0.22	-0.7
2,384,257	-		OLJFJH_11430	0.29	-1.0
2,384,258	+		OLJFJH_11430	0.29	-2.0
2,384,259	-		OLJFJH_11430	0.29	-1.1
2,384,277	+		OLJFJH_11430	0.30	-2.3
2,384,277	+		OLJFJH_11430	0.30	-2.6
2,384,277	+		OLJFJH_11430	0.30	-1.3