Experiment: Matrix:KB soft agar;Phage:inactivated cocktail;Temp:28;Samp:31-1
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt OLJFJH_07265 and OLJFJH_07270 are separated by 132 nucleotides OLJFJH_07270 and OLJFJH_07275 are separated by 176 nucleotides
OLJFJH_07265: OLJFJH_07265 - polyribonucleotide nucleotidyltransferase, at 1,477,436 to 1,479,568
_07265
OLJFJH_07270: OLJFJH_07270 - lipoprotein NlpI, at 1,479,701 to 1,480,585
_07270
OLJFJH_07275: OLJFJH_07275 - DEAD/DEAH family ATP-dependent RNA helicase, at 1,480,762 to 1,482,678
_07275
Position (kb)
1479
1480
1481 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 1478.752 kb on + strand, within OLJFJH_07265 at 1478.752 kb on + strand, within OLJFJH_07265 at 1479.308 kb on + strand, within OLJFJH_07265 at 1479.382 kb on - strand at 1479.385 kb on + strand at 1479.385 kb on + strand at 1479.385 kb on + strand at 1479.385 kb on + strand at 1479.386 kb on - strand at 1479.462 kb on + strand at 1479.671 kb on - strand at 1479.698 kb on + strand at 1479.698 kb on + strand at 1479.698 kb on + strand at 1479.699 kb on - strand at 1479.758 kb on - strand at 1479.775 kb on + strand at 1479.895 kb on - strand, within OLJFJH_07270 at 1479.896 kb on + strand, within OLJFJH_07270 at 1479.914 kb on + strand, within OLJFJH_07270 at 1479.915 kb on - strand, within OLJFJH_07270 at 1479.993 kb on + strand, within OLJFJH_07270 at 1480.011 kb on + strand, within OLJFJH_07270 at 1480.013 kb on + strand, within OLJFJH_07270 at 1480.091 kb on + strand, within OLJFJH_07270 at 1480.138 kb on + strand, within OLJFJH_07270 at 1480.211 kb on + strand, within OLJFJH_07270 at 1480.273 kb on + strand, within OLJFJH_07270 at 1480.273 kb on + strand, within OLJFJH_07270 at 1480.415 kb on + strand, within OLJFJH_07270 at 1480.419 kb on + strand, within OLJFJH_07270 at 1480.419 kb on + strand, within OLJFJH_07270 at 1480.423 kb on + strand, within OLJFJH_07270 at 1480.427 kb on + strand, within OLJFJH_07270 at 1480.427 kb on + strand, within OLJFJH_07270 at 1480.434 kb on + strand, within OLJFJH_07270 at 1480.435 kb on - strand, within OLJFJH_07270 at 1480.584 kb on - strand at 1480.720 kb on + strand at 1480.724 kb on + strand at 1480.725 kb on - strand at 1480.757 kb on - strand at 1480.759 kb on + strand at 1480.837 kb on + strand at 1480.869 kb on + strand at 1480.972 kb on - strand, within OLJFJH_07275
Per-strain Table
Position Strand Gene LocusTag Fraction Matrix:KB soft agar;Phage:inactivated cocktail;Temp:28;Samp:31-1 remove 1,478,752 + OLJFJH_07265 0.62 -0.7 1,478,752 + OLJFJH_07265 0.62 -1.7 1,479,308 + OLJFJH_07265 0.88 -0.9 1,479,382 - +0.3 1,479,385 + -0.8 1,479,385 + -1.3 1,479,385 + -1.3 1,479,385 + -1.1 1,479,386 - -1.1 1,479,462 + -1.3 1,479,671 - -0.3 1,479,698 + -1.8 1,479,698 + -0.5 1,479,698 + -0.5 1,479,699 - -2.1 1,479,758 - +0.9 1,479,775 + +0.9 1,479,895 - OLJFJH_07270 0.22 -0.1 1,479,896 + OLJFJH_07270 0.22 -1.1 1,479,914 + OLJFJH_07270 0.24 -1.3 1,479,915 - OLJFJH_07270 0.24 -0.9 1,479,993 + OLJFJH_07270 0.33 -0.6 1,480,011 + OLJFJH_07270 0.35 +1.1 1,480,013 + OLJFJH_07270 0.35 -0.1 1,480,091 + OLJFJH_07270 0.44 -1.3 1,480,138 + OLJFJH_07270 0.49 -0.1 1,480,211 + OLJFJH_07270 0.58 -0.5 1,480,273 + OLJFJH_07270 0.65 -0.5 1,480,273 + OLJFJH_07270 0.65 +1.9 1,480,415 + OLJFJH_07270 0.81 -0.1 1,480,419 + OLJFJH_07270 0.81 -0.7 1,480,419 + OLJFJH_07270 0.81 -0.7 1,480,423 + OLJFJH_07270 0.82 -2.5 1,480,427 + OLJFJH_07270 0.82 -1.2 1,480,427 + OLJFJH_07270 0.82 -0.6 1,480,434 + OLJFJH_07270 0.83 -2.4 1,480,435 - OLJFJH_07270 0.83 -0.1 1,480,584 - -1.5 1,480,720 + -0.4 1,480,724 + +0.5 1,480,725 - -0.8 1,480,757 - -0.5 1,480,759 + -0.1 1,480,837 + -1.3 1,480,869 + -0.5 1,480,972 - OLJFJH_07275 0.11 +1.9
Or see this region's nucleotide sequence