Strain Fitness in Erwinia amylovora T8 around OLJFJH_03640

Experiment: Matrix:KB soft agar;Phage:inactivated cocktail;Temp:28;Samp:31-1

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntOLJFJH_03630 and OLJFJH_03635 are separated by 293 nucleotidesOLJFJH_03635 and OLJFJH_03640 are separated by 208 nucleotidesOLJFJH_03640 and OLJFJH_03645 are separated by 117 nucleotides OLJFJH_03630: OLJFJH_03630 - glucose-6-phosphate isomerase, at 700,964 to 702,607 _03630 OLJFJH_03635: OLJFJH_03635 - hypothetical protein, at 702,901 to 703,056 _03635 OLJFJH_03640: OLJFJH_03640 - lysine-sensitive aspartokinase 3, at 703,265 to 704,617 _03640 OLJFJH_03645: OLJFJH_03645 - Na+/Pi-cotransporter, at 704,735 to 706,360 _03645 Position (kb) 703 704 705Strain fitness (log2 ratio) -5 -4 -3 -2 -1 0 1 2at 702.654 kb on + strandat 702.655 kb on - strandat 702.764 kb on + strandat 702.765 kb on - strandat 702.777 kb on - strandat 702.892 kb on + strandat 702.896 kb on + strandat 702.948 kb on + strand, within OLJFJH_03635at 702.949 kb on + strand, within OLJFJH_03635at 703.037 kb on + strand, within OLJFJH_03635at 703.038 kb on - strand, within OLJFJH_03635at 703.066 kb on - strandat 703.183 kb on + strandat 703.184 kb on - strandat 703.189 kb on + strandat 703.189 kb on + strandat 703.189 kb on + strandat 703.189 kb on + strandat 703.189 kb on + strandat 703.190 kb on - strandat 703.233 kb on + strandat 703.233 kb on + strandat 703.233 kb on + strandat 703.234 kb on - strandat 703.236 kb on + strandat 703.237 kb on - strandat 703.263 kb on + strandat 703.263 kb on + strandat 703.263 kb on + strandat 703.264 kb on - strandat 703.317 kb on - strandat 703.317 kb on - strandat 703.318 kb on + strandat 703.319 kb on - strandat 703.518 kb on + strand, within OLJFJH_03640at 703.519 kb on - strand, within OLJFJH_03640at 703.549 kb on + strand, within OLJFJH_03640at 703.626 kb on + strand, within OLJFJH_03640at 703.626 kb on + strand, within OLJFJH_03640at 703.627 kb on - strand, within OLJFJH_03640at 703.692 kb on + strand, within OLJFJH_03640at 703.693 kb on - strand, within OLJFJH_03640at 703.696 kb on + strand, within OLJFJH_03640at 703.874 kb on + strand, within OLJFJH_03640at 703.877 kb on - strand, within OLJFJH_03640at 703.921 kb on + strand, within OLJFJH_03640at 703.947 kb on - strand, within OLJFJH_03640at 703.947 kb on - strand, within OLJFJH_03640at 704.105 kb on - strand, within OLJFJH_03640at 704.130 kb on + strand, within OLJFJH_03640at 704.130 kb on + strand, within OLJFJH_03640at 704.130 kb on + strand, within OLJFJH_03640at 704.133 kb on + strand, within OLJFJH_03640at 704.133 kb on + strand, within OLJFJH_03640at 704.133 kb on + strand, within OLJFJH_03640at 704.133 kb on + strand, within OLJFJH_03640at 704.186 kb on - strand, within OLJFJH_03640at 704.223 kb on + strand, within OLJFJH_03640at 704.224 kb on - strand, within OLJFJH_03640at 704.224 kb on - strand, within OLJFJH_03640at 704.250 kb on + strand, within OLJFJH_03640at 704.250 kb on + strand, within OLJFJH_03640at 704.251 kb on - strand, within OLJFJH_03640at 704.254 kb on + strand, within OLJFJH_03640at 704.254 kb on + strand, within OLJFJH_03640at 704.255 kb on - strand, within OLJFJH_03640at 704.275 kb on + strand, within OLJFJH_03640at 704.276 kb on - strand, within OLJFJH_03640at 704.276 kb on - strand, within OLJFJH_03640at 704.485 kb on - strandat 704.540 kb on + strandat 704.540 kb on + strandat 704.540 kb on + strandat 704.541 kb on - strandat 704.541 kb on - strandat 704.541 kb on - strandat 704.541 kb on - strandat 704.618 kb on + strandat 704.778 kb on + strandat 704.816 kb on - strandat 704.895 kb on + strandat 704.895 kb on + strandat 704.895 kb on + strandat 704.896 kb on - strandat 704.896 kb on - strandat 704.972 kb on + strand, within OLJFJH_03645at 705.210 kb on + strand, within OLJFJH_03645at 705.210 kb on + strand, within OLJFJH_03645at 705.228 kb on + strand, within OLJFJH_03645at 705.228 kb on + strand, within OLJFJH_03645at 705.228 kb on + strand, within OLJFJH_03645at 705.228 kb on + strand, within OLJFJH_03645at 705.229 kb on - strand, within OLJFJH_03645at 705.229 kb on - strand, within OLJFJH_03645at 705.326 kb on + strand, within OLJFJH_03645at 705.415 kb on + strand, within OLJFJH_03645at 705.416 kb on - strand, within OLJFJH_03645at 705.461 kb on + strand, within OLJFJH_03645at 705.461 kb on + strand, within OLJFJH_03645at 705.461 kb on + strand, within OLJFJH_03645at 705.462 kb on - strand, within OLJFJH_03645at 705.462 kb on - strand, within OLJFJH_03645at 705.462 kb on - strand, within OLJFJH_03645at 705.462 kb on - strand, within OLJFJH_03645at 705.462 kb on - strand, within OLJFJH_03645at 705.516 kb on + strand, within OLJFJH_03645at 705.592 kb on + strand, within OLJFJH_03645at 705.593 kb on - strand, within OLJFJH_03645

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Per-strain Table

Position Strand Gene LocusTag Fraction Matrix:KB soft agar;Phage:inactivated cocktail;Temp:28;Samp:31-1
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702,654 + -0.9
702,655 - -0.1
702,764 + -0.0
702,765 - -0.2
702,777 - -0.1
702,892 + -0.2
702,896 + +0.2
702,948 + OLJFJH_03635 0.30 -0.4
702,949 + OLJFJH_03635 0.31 -0.7
703,037 + OLJFJH_03635 0.87 +0.1
703,038 - OLJFJH_03635 0.88 -1.5
703,066 - -3.8
703,183 + -1.7
703,184 - -2.5
703,189 + +0.7
703,189 + +0.1
703,189 + -0.6
703,189 + -0.2
703,189 + +0.2
703,190 - -3.3
703,233 + -0.0
703,233 + +1.6
703,233 + +0.6
703,234 - -4.0
703,236 + +0.3
703,237 - -4.6
703,263 + -2.9
703,263 + -2.8
703,263 + -4.5
703,264 - -3.5
703,317 - -0.8
703,317 - -3.6
703,318 + -3.4
703,319 - -0.8
703,518 + OLJFJH_03640 0.19 -3.6
703,519 - OLJFJH_03640 0.19 -3.2
703,549 + OLJFJH_03640 0.21 -3.8
703,626 + OLJFJH_03640 0.27 -2.8
703,626 + OLJFJH_03640 0.27 -3.6
703,627 - OLJFJH_03640 0.27 -3.9
703,692 + OLJFJH_03640 0.32 -0.5
703,693 - OLJFJH_03640 0.32 -2.8
703,696 + OLJFJH_03640 0.32 -4.8
703,874 + OLJFJH_03640 0.45 -3.4
703,877 - OLJFJH_03640 0.45 -0.5
703,921 + OLJFJH_03640 0.48 -4.0
703,947 - OLJFJH_03640 0.50 -3.7
703,947 - OLJFJH_03640 0.50 -2.2
704,105 - OLJFJH_03640 0.62 -5.2
704,130 + OLJFJH_03640 0.64 -1.3
704,130 + OLJFJH_03640 0.64 -3.5
704,130 + OLJFJH_03640 0.64 -3.9
704,133 + OLJFJH_03640 0.64 -4.3
704,133 + OLJFJH_03640 0.64 -2.9
704,133 + OLJFJH_03640 0.64 -3.1
704,133 + OLJFJH_03640 0.64 -2.1
704,186 - OLJFJH_03640 0.68 -2.9
704,223 + OLJFJH_03640 0.71 -2.9
704,224 - OLJFJH_03640 0.71 -1.0
704,224 - OLJFJH_03640 0.71 -1.9
704,250 + OLJFJH_03640 0.73 -1.5
704,250 + OLJFJH_03640 0.73 -3.6
704,251 - OLJFJH_03640 0.73 -3.6
704,254 + OLJFJH_03640 0.73 -2.5
704,254 + OLJFJH_03640 0.73 -4.2
704,255 - OLJFJH_03640 0.73 -2.8
704,275 + OLJFJH_03640 0.75 -2.7
704,276 - OLJFJH_03640 0.75 -3.4
704,276 - OLJFJH_03640 0.75 -3.5
704,485 - -1.7
704,540 + -3.8
704,540 + -3.6
704,540 + -4.1
704,541 - -2.2
704,541 - -4.8
704,541 - -4.8
704,541 - -3.1
704,618 + -0.1
704,778 + +0.8
704,816 - +1.0
704,895 + -0.2
704,895 + +0.2
704,895 + +0.6
704,896 - +0.8
704,896 - -0.2
704,972 + OLJFJH_03645 0.15 +0.2
705,210 + OLJFJH_03645 0.29 +0.3
705,210 + OLJFJH_03645 0.29 -1.3
705,228 + OLJFJH_03645 0.30 -0.1
705,228 + OLJFJH_03645 0.30 -0.2
705,228 + OLJFJH_03645 0.30 -0.3
705,228 + OLJFJH_03645 0.30 +0.3
705,229 - OLJFJH_03645 0.30 +1.9
705,229 - OLJFJH_03645 0.30 +0.4
705,326 + OLJFJH_03645 0.36 -0.5
705,415 + OLJFJH_03645 0.42 +0.2
705,416 - OLJFJH_03645 0.42 -0.1
705,461 + OLJFJH_03645 0.45 +0.1
705,461 + OLJFJH_03645 0.45 -0.1
705,461 + OLJFJH_03645 0.45 +0.7
705,462 - OLJFJH_03645 0.45 -0.6
705,462 - OLJFJH_03645 0.45 +0.1
705,462 - OLJFJH_03645 0.45 -0.3
705,462 - OLJFJH_03645 0.45 -0.2
705,462 - OLJFJH_03645 0.45 +0.1
705,516 + OLJFJH_03645 0.48 -0.6
705,592 + OLJFJH_03645 0.53 -0.4
705,593 - OLJFJH_03645 0.53 -0.3

Or see this region's nucleotide sequence