Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS25595

Experiment: plant=Melon; plant sample=M5; plant location=P2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	plant=Melon; plant sample=M5; plant location=P2
47,029	-				-3.9
47,033	-				-0.0
47,162	+				-1.7
47,162	+				-0.6
47,162	+				-1.2
47,163	-				-0.1
47,163	-				-0.7
47,164	-				+0.6
47,196	+				-1.4
47,209	-				-0.5
47,216	-				+1.7
47,218	+				+2.9
47,219	-				-0.8
47,219	-				+2.4
47,240	-				+1.9
47,282	+				-0.4
47,307	-				+0.1
47,317	-				-1.2
47,419	+				-0.8
47,419	+				+0.1
47,500	-				-0.1
47,503	+				+3.8
47,540	+				-2.6
47,557	+				-0.2
47,589	-				+0.3
47,692	-				+0.7
47,692	-				+0.1
47,754	-				+0.4
47,777	-				+0.7
47,843	-				-1.4
47,845	+				-2.2
47,856	-				-0.4
47,859	+				-0.3
47,862	+				-1.4
47,882	+				-0.4
47,917	+				+0.6
49,407	-				-0.6
49,407	-				+0.3
49,422	-		LU632_RS25600	0.11	-2.9
49,457	+		LU632_RS25600	0.15	+0.2
49,458	-		LU632_RS25600	0.15	-2.9
49,458	-		LU632_RS25600	0.15	-1.4
49,476	+		LU632_RS25600	0.18	+0.4
49,514	+		LU632_RS25600	0.23	-2.4
49,515	-		LU632_RS25600	0.23	+1.4
49,516	+		LU632_RS25600	0.23	-0.3
49,530	+		LU632_RS25600	0.25	-0.5
49,532	+		LU632_RS25600	0.25	-1.7
49,681	-		LU632_RS25600	0.44	+3.3
49,683	-		LU632_RS25600	0.45	-0.9
49,753	+		LU632_RS25600	0.54	-2.7
49,848	+		LU632_RS25600	0.66	-0.3
49,964	+		LU632_RS25600	0.81	+1.6
50,042	+				-0.3
50,049	-				+0.0
50,052	+				+0.2
50,078	-				+0.6
50,080	+				+1.1
50,080	+				-0.8
50,080	+				-1.2
50,081	-				+1.9
50,148	+				-0.4
50,148	+				+1.4
50,149	-				+1.6
50,210	+				+0.2
50,218	-				-3.0