Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS23350

Experiment: plant=Melon; plant sample=M5; plant location=P2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	plant=Melon; plant sample=M5; plant location=P2
4,447,300	-	sbmA	LU632_RS23345	0.80	-0.3
4,447,300	-	sbmA	LU632_RS23345	0.80	-0.3
4,447,352	+	sbmA	LU632_RS23345	0.84	-0.2
4,447,352	+	sbmA	LU632_RS23345	0.84	-0.3
4,447,353	-	sbmA	LU632_RS23345	0.84	-0.8
4,447,353	-	sbmA	LU632_RS23345	0.84	-1.1
4,447,534	-				+1.1
4,447,567	+				-0.0
4,447,568	-				+2.3
4,447,569	+				-0.8
4,447,670	-				-0.6
4,447,686	-				+1.6
4,447,890	-				+1.1
4,447,892	-				-0.6
4,447,892	-				-0.6
4,448,043	-				+1.7
4,448,082	-				-0.9
4,448,088	-				+0.8
4,448,130	+				+0.6
4,448,146	+				-0.5
4,448,978	+				-0.2
4,448,979	-				-1.3
4,448,986	+				-0.5
4,448,987	-				-0.4
4,449,163	-				-0.8
4,449,167	-				-1.0
4,449,243	+				-2.0
4,449,243	+				-0.1
4,449,244	-				-1.8
4,449,275	+				-0.1
4,449,275	+				-0.3
4,449,275	+				-0.3
4,449,275	+				-0.4
4,449,275	+				-1.0
4,449,275	+				-0.6
4,449,275	+				+1.9
4,449,276	-				-0.0
4,449,278	-				+0.9
4,449,278	-				-0.5
4,449,278	-				+1.3
4,449,331	+				-0.1
4,449,332	-				-1.8
4,449,338	+				+0.3
4,449,340	+				-2.6
4,449,501	-		LU632_RS23355	0.14	-1.1
4,449,524	-		LU632_RS23355	0.15	+0.3
4,449,635	-		LU632_RS23355	0.20	+0.5
4,449,864	-		LU632_RS23355	0.31	-0.3
4,449,866	+		LU632_RS23355	0.31	-1.0
4,449,867	-		LU632_RS23355	0.31	+0.6
4,449,867	-		LU632_RS23355	0.31	-0.8