Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS23105

Experiment: plant=Melon; plant sample=M5; plant location=P2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	plant=Melon; plant sample=M5; plant location=P2
4,400,794	+	ggt	LU632_RS23100	0.66	+1.9
4,400,798	+	ggt	LU632_RS23100	0.66	-0.3
4,400,798	+	ggt	LU632_RS23100	0.66	-2.6
4,400,798	+	ggt	LU632_RS23100	0.66	-1.0
4,400,798	+	ggt	LU632_RS23100	0.66	-0.3
4,400,799	-	ggt	LU632_RS23100	0.67	-0.3
4,400,799	-	ggt	LU632_RS23100	0.67	+0.1
4,400,992	+	ggt	LU632_RS23100	0.77	+0.4
4,401,067	+	ggt	LU632_RS23100	0.82	+0.8
4,401,070	+	ggt	LU632_RS23100	0.82	-0.6
4,401,147	-	ggt	LU632_RS23100	0.86	+0.7
4,401,149	+	ggt	LU632_RS23100	0.86	-2.1
4,401,149	+	ggt	LU632_RS23100	0.86	+0.1
4,401,175	+	ggt	LU632_RS23100	0.88	+1.6
4,401,176	-	ggt	LU632_RS23100	0.88	-0.3
4,401,244	+				-1.1
4,401,244	+				-0.6
4,401,268	+				-2.1
4,401,322	-				-1.3
4,401,322	-				-0.7
4,401,490	+				+1.3
4,401,494	+				-0.1
4,401,567	-				-0.4
4,401,571	-				+1.6
4,401,612	+				+0.7
4,401,613	-				-0.1
4,401,637	+				-0.4
4,401,658	-				+0.0
4,401,725	+				+1.5
4,402,407	-				+1.2
4,402,410	-				+0.2
4,403,026	-				-1.1