Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS18095

Experiment: plant=Melon; plant sample=M5; plant location=P2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	plant=Melon; plant sample=M5; plant location=P2
3,419,418	+				+0.7
3,420,161	-				+0.7
3,420,168	-				-0.1
3,420,182	+				-1.5
3,420,182	+				-0.7
3,420,183	-				+0.6
3,420,183	-				-2.1
3,420,183	-				-1.1
3,420,186	+				-0.3
3,420,187	-				+0.3
3,420,209	-				+0.4
3,420,218	+				+0.4
3,420,219	-				+1.2
3,420,219	-				+0.6
3,420,230	+				+0.9
3,420,230	+				-0.3
3,420,231	-				-0.9
3,420,231	-				+0.3
3,420,282	-				+0.7
3,420,423	+				+0.1
3,420,570	-				+0.5
3,420,629	-	htpG	LU632_RS18100	0.13	-1.9
3,420,629	-	htpG	LU632_RS18100	0.13	-0.3
3,420,663	+	htpG	LU632_RS18100	0.14	+1.0
3,420,838	-	htpG	LU632_RS18100	0.24	+0.1
3,420,857	+	htpG	LU632_RS18100	0.25	-0.7
3,420,858	-	htpG	LU632_RS18100	0.25	-0.7
3,420,858	-	htpG	LU632_RS18100	0.25	+0.1
3,420,879	+	htpG	LU632_RS18100	0.26	-0.1
3,420,956	+	htpG	LU632_RS18100	0.30	+0.7
3,420,974	+	htpG	LU632_RS18100	0.31	+0.1
3,420,975	-	htpG	LU632_RS18100	0.31	+0.7
3,421,013	+	htpG	LU632_RS18100	0.33	-1.5