Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS16925

Experiment: plant=Melon; plant sample=M5; plant location=P2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	plant=Melon; plant sample=M5; plant location=P2
3,188,355	+		LU632_RS16920	0.67	+0.5
3,188,355	+		LU632_RS16920	0.67	-0.7
3,188,366	-		LU632_RS16920	0.67	+2.9
3,188,368	+		LU632_RS16920	0.67	-1.8
3,188,368	+		LU632_RS16920	0.67	-0.3
3,188,369	-		LU632_RS16920	0.67	+0.8
3,188,369	-		LU632_RS16920	0.67	-1.0
3,188,371	-		LU632_RS16920	0.67	-1.8
3,188,523	+		LU632_RS16920	0.73	+0.0
3,188,523	+		LU632_RS16920	0.73	+0.3
3,188,524	-		LU632_RS16920	0.73	+1.0
3,188,524	-		LU632_RS16920	0.73	+1.6
3,188,524	-		LU632_RS16920	0.73	+0.7
3,188,524	-		LU632_RS16920	0.73	-2.2
3,188,524	-		LU632_RS16920	0.73	-0.7
3,188,524	-		LU632_RS16920	0.73	-0.1
3,188,563	+		LU632_RS16920	0.74	-0.4
3,188,666	-		LU632_RS16920	0.78	-1.4
3,188,828	+		LU632_RS16920	0.84	-1.0
3,188,852	-		LU632_RS16920	0.85	+1.2
3,188,939	-		LU632_RS16920	0.88	+0.7
3,188,953	-		LU632_RS16920	0.89	+0.0
3,188,987	-				+2.6
3,188,987	-				+0.4
3,189,015	+				-1.2
3,189,093	+				+1.3
3,189,093	+				+1.4
3,189,138	+				-0.4
3,189,138	+				-0.3
3,189,138	+				+0.6
3,189,213	+				-1.0
3,189,214	-				-1.6
3,189,214	-				+0.6
3,189,214	-				+0.1
3,189,217	+				+1.9
3,189,217	+				-0.4
3,189,218	-				+0.0
3,189,320	+				+1.3
3,190,718	-				+0.8
3,190,790	+				+0.1
3,190,847	+				-0.8
3,190,849	+				+2.4
3,190,872	+				-1.6
3,190,913	-				+0.3
3,191,693	-				-0.9