Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS16865

Experiment: plant=Melon; plant sample=M5; plant location=P2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	plant=Melon; plant sample=M5; plant location=P2
3,178,388	+	tnpA	LU632_RS16865	0.77	-0.4
3,178,388	+	tnpA	LU632_RS16865	0.77	+0.5
3,178,444	+	tnpA	LU632_RS16865	0.90	+1.2
3,178,653	+				+1.9
3,178,660	+				-3.1
3,178,879	+		LU632_RS16870	0.22	-0.3
3,178,880	-		LU632_RS16870	0.22	+0.1
3,178,940	+		LU632_RS16870	0.28	+0.3
3,178,940	+		LU632_RS16870	0.28	+0.5
3,178,940	+		LU632_RS16870	0.28	+1.3
3,178,941	-		LU632_RS16870	0.28	-2.2
3,178,941	-		LU632_RS16870	0.28	+0.6
3,178,941	-		LU632_RS16870	0.28	-1.8
3,178,941	-		LU632_RS16870	0.28	-1.2
3,178,941	-		LU632_RS16870	0.28	+1.3
3,179,012	+		LU632_RS16870	0.35	-0.7
3,179,047	+		LU632_RS16870	0.38	+0.6
3,179,140	+		LU632_RS16870	0.47	-1.6
3,179,140	+		LU632_RS16870	0.47	-0.6
3,179,229	+		LU632_RS16870	0.56	+1.0
3,179,258	+		LU632_RS16870	0.58	+0.3
3,179,358	+		LU632_RS16870	0.68	-0.7
3,179,460	+		LU632_RS16870	0.78	-1.8