Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS16415

Experiment: plant=Melon; plant sample=M5; plant location=P2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	plant=Melon; plant sample=M5; plant location=P2
3,107,350	+				-0.1
3,107,393	-				+0.3
3,108,168	+	tatE	LU632_RS16415	0.75	-2.9
3,108,299	-				+0.1
3,108,321	+				+0.3
3,108,322	-				-0.9
3,108,322	-				-0.5
3,108,324	+				+0.0
3,108,492	+				+2.1
3,108,517	+				-0.4
3,108,517	+				+1.5
3,108,518	-				+0.5
3,108,518	-				+2.9
3,108,522	-				+0.2
3,108,522	-				-0.8
3,108,554	-				+1.5
3,108,658	-		LU632_RS16420	0.12	+0.9
3,108,751	+		LU632_RS16420	0.23	-0.0
3,108,752	-		LU632_RS16420	0.23	+0.7
3,108,754	+		LU632_RS16420	0.23	+0.9
3,108,754	+		LU632_RS16420	0.23	-2.4
3,108,760	+		LU632_RS16420	0.24	-0.5
3,108,796	-		LU632_RS16420	0.28	+0.4
3,109,030	+		LU632_RS16420	0.57	-0.1
3,109,033	+		LU632_RS16420	0.57	+0.1
3,109,033	+		LU632_RS16420	0.57	+0.4
3,109,033	+		LU632_RS16420	0.57	+1.3
3,109,044	+		LU632_RS16420	0.59	+1.4
3,109,052	+		LU632_RS16420	0.59	-0.9
3,109,052	+		LU632_RS16420	0.59	+0.6
3,109,052	+		LU632_RS16420	0.59	+2.9
3,109,053	-		LU632_RS16420	0.60	+0.6
3,109,135	-		LU632_RS16420	0.70	-0.2
3,109,135	-		LU632_RS16420	0.70	-0.9