Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS14490

Experiment: plant=Melon; plant sample=M5; plant location=P2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	plant=Melon; plant sample=M5; plant location=P2
2,758,833	+				-2.4
2,759,040	+		LU632_RS14480	0.18	+3.1
2,759,040	+		LU632_RS14480	0.18	-0.9
2,759,040	+		LU632_RS14480	0.18	+0.5
2,759,051	+		LU632_RS14480	0.20	+0.5
2,759,051	+		LU632_RS14480	0.20	-0.1
2,759,051	+		LU632_RS14480	0.20	-1.9
2,759,051	+		LU632_RS14480	0.20	-0.8
2,759,121	+		LU632_RS14480	0.32	-0.6
2,759,121	+		LU632_RS14480	0.32	-1.2
2,759,153	+		LU632_RS14480	0.38	-1.1
2,759,153	+		LU632_RS14480	0.38	-1.8
2,759,199	+		LU632_RS14480	0.46	+2.5
2,759,199	+		LU632_RS14480	0.46	-0.3
2,759,199	+		LU632_RS14480	0.46	+1.1
2,759,658	+		LU632_RS14485	0.66	-0.6
2,759,686	+		LU632_RS14485	0.80	+0.5
2,759,728	+				-2.3
2,760,644	+				+1.0
2,760,644	+				+2.1
2,760,644	+				+1.1
2,760,644	+				-1.7
2,760,670	-				+1.3
2,760,679	+				+1.3
2,760,762	+		LU632_RS14495	0.29	-1.3
2,760,762	+		LU632_RS14495	0.29	-0.1
2,760,762	+		LU632_RS14495	0.29	+1.6
2,760,763	-		LU632_RS14495	0.29	-1.0
2,760,763	-		LU632_RS14495	0.29	-1.7
2,760,763	-		LU632_RS14495	0.29	+0.2
2,760,763	-		LU632_RS14495	0.29	-0.5
2,760,763	-		LU632_RS14495	0.29	+0.4
2,760,763	-		LU632_RS14495	0.29	+0.3
2,761,016	+		LU632_RS14500	0.38	-0.4
2,761,016	+		LU632_RS14500	0.38	+0.5
2,761,017	-		LU632_RS14500	0.38	+0.7
2,761,111	-		LU632_RS14500	0.82	-0.5
2,761,115	-		LU632_RS14500	0.84	-0.3
2,761,115	-		LU632_RS14500	0.84	-0.4
2,761,115	-		LU632_RS14500	0.84	+0.5
2,761,169	-				+0.0
2,761,264	+				-0.7
2,761,265	-				+0.2
2,761,322	+				-1.0
2,761,398	+				-1.3
2,761,447	-				-0.3
2,761,447	-				+0.9
2,761,447	-				-1.1