Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS13670

Experiment: plant=Melon; plant sample=M5; plant location=P2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	plant=Melon; plant sample=M5; plant location=P2
2,608,393	+	ghrA	LU632_RS13665	0.29	-1.0
2,608,394	-	ghrA	LU632_RS13665	0.29	-2.0
2,608,454	+	ghrA	LU632_RS13665	0.35	-0.9
2,608,454	+	ghrA	LU632_RS13665	0.35	+0.6
2,608,455	-	ghrA	LU632_RS13665	0.35	-0.7
2,608,455	-	ghrA	LU632_RS13665	0.35	+2.2
2,608,636	-	ghrA	LU632_RS13665	0.55	-1.9
2,608,743	+	ghrA	LU632_RS13665	0.66	-1.1
2,608,744	-	ghrA	LU632_RS13665	0.66	+0.8
2,608,746	-	ghrA	LU632_RS13665	0.66	-2.2
2,608,753	-	ghrA	LU632_RS13665	0.67	-0.0
2,608,819	+	ghrA	LU632_RS13665	0.74	+1.7
2,608,819	+	ghrA	LU632_RS13665	0.74	-0.7
2,608,835	+	ghrA	LU632_RS13665	0.76	+0.8
2,608,836	+	ghrA	LU632_RS13665	0.76	+0.2
2,609,029	-				-1.2
2,609,158	+				+0.1
2,609,159	-				+1.9
2,609,159	-				+0.1
2,609,159	-				-0.3
2,609,159	-				+0.6
2,609,160	+				+0.3
2,609,160	+				+0.3
2,609,161	-				-0.1
2,609,161	-				-1.4
2,609,207	+				-0.9
2,609,243	-				+0.0
2,609,245	+				+0.5
2,609,245	+				-1.1
2,610,859	-				-0.6
2,610,897	+				-0.0
2,610,898	-				+0.5
2,610,956	+		LU632_RS13675	0.51	-0.5
2,610,956	+		LU632_RS13675	0.51	+0.6
2,611,131	+				+2.1
2,611,263	+				-1.5
2,611,264	-				+0.3
2,611,356	-				-0.9