Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS13095

Experiment: plant=Melon; plant sample=M5; plant location=P2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	plant=Melon; plant sample=M5; plant location=P2
2,499,504	+				-0.6
2,499,547	-				+1.7
2,499,556	-				+0.3
2,499,578	-				+0.6
2,499,578	-				-0.1
2,499,596	+				+0.4
2,499,596	+				-1.6
2,499,597	-				-0.1
2,499,627	-				+0.8
2,500,444	-				-0.5
2,501,199	+				-0.5
2,501,200	-				+0.8
2,501,235	-				-0.8
2,501,269	+				+0.9
2,501,273	+				+1.7
2,501,355	+				-0.9
2,501,389	+				+0.4
2,501,500	-		LU632_RS13100	0.16	-0.2
2,501,669	+		LU632_RS13100	0.54	+1.4
2,501,687	+		LU632_RS13100	0.58	+0.5
2,501,687	+		LU632_RS13100	0.58	+0.5
2,501,688	-		LU632_RS13100	0.58	-2.0
2,501,688	-		LU632_RS13100	0.58	-0.5
2,501,711	-		LU632_RS13100	0.63	-0.0
2,501,745	-		LU632_RS13100	0.71	+0.6
2,501,745	-		LU632_RS13100	0.71	+2.2
2,501,770	+		LU632_RS13100	0.76	-1.3
2,501,775	+		LU632_RS13100	0.77	+0.2
2,501,775	+		LU632_RS13100	0.77	+0.6
2,501,807	-		LU632_RS13100	0.85	+1.0
2,501,807	-		LU632_RS13100	0.85	-0.7
2,501,924	-				+0.4
2,501,924	-				+0.2
2,501,939	+				-1.6
2,501,942	-				+1.9
2,502,072	+		LU632_RS13105	0.20	-1.1
2,502,074	+		LU632_RS13105	0.21	-0.2
2,502,074	+		LU632_RS13105	0.21	+0.6
2,502,074	+		LU632_RS13105	0.21	+0.3
2,502,081	+		LU632_RS13105	0.22	+0.2
2,502,105	+		LU632_RS13105	0.25	+0.3
2,502,105	+		LU632_RS13105	0.25	-1.7
2,502,106	-		LU632_RS13105	0.25	-0.1