Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS10360

Experiment: plant=Melon; plant sample=M5; plant location=P2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	plant=Melon; plant sample=M5; plant location=P2
1,979,097	-		LU632_RS10355	0.30	+1.1
1,979,144	+		LU632_RS10355	0.37	+2.4
1,979,145	-		LU632_RS10355	0.37	-2.0
1,979,145	-		LU632_RS10355	0.37	-1.6
1,979,145	-		LU632_RS10355	0.37	+0.5
1,979,185	+		LU632_RS10355	0.43	+0.0
1,979,186	-		LU632_RS10355	0.43	+0.4
1,979,231	-		LU632_RS10355	0.50	+0.2
1,979,279	-		LU632_RS10355	0.58	+0.4
1,979,289	-		LU632_RS10355	0.59	-0.2
1,979,395	-		LU632_RS10355	0.76	-0.2
1,979,396	+		LU632_RS10355	0.76	+0.9
1,979,396	+		LU632_RS10355	0.76	-2.0
1,979,397	-		LU632_RS10355	0.76	+0.0
1,979,397	-		LU632_RS10355	0.76	+0.4
1,979,445	-		LU632_RS10355	0.83	+0.9
1,979,445	-		LU632_RS10355	0.83	+0.4
1,979,513	-				-0.2
1,979,559	+				+1.7
1,979,567	+				-1.7
1,979,567	+				+1.4
1,979,624	-				-0.2
1,979,704	+				+0.1
1,979,719	-				-0.2
1,979,783	-				+1.7
1,979,785	+				-1.1
1,979,785	+				-2.2
1,979,785	+				+1.5
1,979,810	+				+1.1
1,979,811	-				+0.2
1,979,820	+				-0.5
1,979,820	+				+0.1
1,980,069	-				+0.0
1,980,106	-				-1.2
1,980,318	+		LU632_RS10360	0.74	+0.4
1,980,319	-		LU632_RS10360	0.75	-0.1
1,980,398	-				-0.2
1,980,435	-				-0.4
1,980,441	-				+1.7