Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS10295

Experiment: plant=Melon; plant sample=M5; plant location=P2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	plant=Melon; plant sample=M5; plant location=P2
1,966,130	-				-0.9
1,966,198	+				-0.9
1,966,198	+				-3.2
1,966,199	-				-2.3
1,966,199	-				+0.1
1,966,199	-				+0.5
1,966,202	+				-0.5
1,966,203	-				-0.4
1,966,203	-				+0.6
1,966,203	-				+0.1
1,966,203	-				+0.9
1,966,203	-				-0.7
1,966,286	-		LU632_RS10290	0.15	-0.6
1,966,316	+		LU632_RS10290	0.20	+0.8
1,966,316	+		LU632_RS10290	0.20	+0.8
1,966,316	+		LU632_RS10290	0.20	-0.7
1,966,421	-		LU632_RS10290	0.39	-1.0
1,966,453	-		LU632_RS10290	0.44	+0.5
1,966,462	+		LU632_RS10290	0.46	+3.7
1,966,492	+		LU632_RS10290	0.51	-0.6
1,966,524	+		LU632_RS10290	0.57	-0.8
1,966,524	+		LU632_RS10290	0.57	-0.2
1,966,524	+		LU632_RS10290	0.57	+2.6
1,966,525	-		LU632_RS10290	0.57	+0.1
1,966,629	-		LU632_RS10290	0.76	+2.9
1,966,683	-		LU632_RS10290	0.86	+0.7
1,966,726	+				-0.4
1,966,729	+				+1.2
1,966,729	+				-0.7
1,966,730	-				-0.1
1,966,730	-				-0.5
1,966,730	-				-0.3
1,966,730	-				+2.2
1,966,730	-				+3.3
1,966,740	+				+2.6
1,966,742	+				+0.0
1,966,742	+				-0.1
1,966,748	+				+0.1
1,966,960	+				-2.0
1,966,963	-				-1.3
1,967,093	+				+0.4
1,967,093	+				+0.4
1,967,093	+				-1.3
1,967,093	+				-0.2
1,967,093	+				-0.6
1,967,093	+				-0.6
1,967,093	+				-1.7
1,967,093	+				-1.4
1,967,093	+				+0.0
1,967,094	-				-1.1
1,967,094	-				-1.6
1,967,094	-				-1.8
1,967,094	-				+1.9
1,967,094	-				+0.4
1,967,094	-				+1.4
1,967,095	+				-0.3
1,967,095	+				+0.2
1,967,095	+				-0.8
1,967,095	+				-1.6
1,967,096	-				+0.4
1,967,096	-				-1.2
1,967,096	-				-0.4
1,967,096	-				-0.8
1,967,135	+		LU632_RS10295	0.11	-1.9
1,967,375	+		LU632_RS10295	0.37	-1.6
1,967,412	+		LU632_RS10295	0.41	-1.7
1,967,420	+		LU632_RS10295	0.42	-0.6
1,967,613	-		LU632_RS10295	0.63	-0.8
1,967,813	+		LU632_RS10295	0.84	+0.2
1,967,879	-				-0.6
1,967,937	-				+0.9
1,968,008	+				+0.8
1,968,011	-				-0.6
1,968,014	+				-0.5
1,968,021	+				-0.3
1,968,052	+				-0.2
1,968,174	+				+2.4
1,968,224	+				+1.0
1,968,250	+				+0.3
1,968,251	-				+0.4
1,968,251	-				+2.7
1,968,264	-				+3.3
1,968,318	+				-0.6
1,968,324	+				+1.4
1,968,343	-				-1.8
1,968,346	+				+2.2
1,968,346	+				-0.1
1,968,347	-				+0.9
1,968,436	+				-0.1
1,968,458	+				+0.5