Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS09930

Experiment: plant=Melon; plant sample=M5; plant location=P2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	plant=Melon; plant sample=M5; plant location=P2
1,896,225	-				+2.7
1,896,404	+				-0.4
1,896,404	+				-0.8
1,896,408	+				-1.8
1,896,432	-				+0.1
1,896,432	-				-0.5
1,896,452	+				-0.1
1,896,488	+				+0.6
1,896,489	-				-0.8
1,896,489	-				-1.5
1,896,586	+				+0.6
1,896,587	-				-0.1
1,896,615	-				-0.8
1,896,629	+				+0.7
1,896,630	-				+0.5
1,896,670	+				+0.3
1,896,671	-				-1.3
1,896,702	-	pepN	LU632_RS09930	0.10	-0.8
1,896,702	-	pepN	LU632_RS09930	0.10	+0.0
1,896,723	-	pepN	LU632_RS09930	0.11	-1.0
1,896,736	+	pepN	LU632_RS09930	0.12	+0.9
1,896,736	+	pepN	LU632_RS09930	0.12	+0.9
1,896,737	-	pepN	LU632_RS09930	0.12	+0.9
1,896,737	-	pepN	LU632_RS09930	0.12	-0.4
1,896,812	+	pepN	LU632_RS09930	0.15	-2.5
1,896,815	+	pepN	LU632_RS09930	0.15	+4.1
1,896,816	-	pepN	LU632_RS09930	0.15	-0.5
1,896,898	+	pepN	LU632_RS09930	0.18	+0.3
1,897,334	+	pepN	LU632_RS09930	0.34	-2.2
1,897,378	+	pepN	LU632_RS09930	0.36	+0.3
1,897,448	-	pepN	LU632_RS09930	0.39	-2.4
1,897,455	-	pepN	LU632_RS09930	0.39	+0.1
1,897,458	-	pepN	LU632_RS09930	0.39	+0.9
1,897,460	+	pepN	LU632_RS09930	0.39	-0.1
1,897,565	+	pepN	LU632_RS09930	0.43	+0.8
1,897,573	-	pepN	LU632_RS09930	0.44	-2.2
1,897,608	-	pepN	LU632_RS09930	0.45	-0.5
1,897,764	-	pepN	LU632_RS09930	0.51	-2.8
1,897,772	-	pepN	LU632_RS09930	0.51	-0.1
1,897,791	+	pepN	LU632_RS09930	0.52	-0.3
1,897,791	+	pepN	LU632_RS09930	0.52	+1.3
1,897,792	-	pepN	LU632_RS09930	0.52	-0.1
1,897,792	-	pepN	LU632_RS09930	0.52	+0.7
1,897,792	-	pepN	LU632_RS09930	0.52	-0.4
1,897,794	-	pepN	LU632_RS09930	0.52	-1.2
1,897,794	-	pepN	LU632_RS09930	0.52	+1.3
1,897,812	+	pepN	LU632_RS09930	0.53	-1.6
1,897,813	-	pepN	LU632_RS09930	0.53	-0.9
1,897,813	-	pepN	LU632_RS09930	0.53	-0.1
1,897,885	+	pepN	LU632_RS09930	0.56	+0.0
1,897,890	-	pepN	LU632_RS09930	0.56	+0.3
1,898,027	-	pepN	LU632_RS09930	0.61	+0.4
1,898,061	+	pepN	LU632_RS09930	0.62	-1.1
1,898,063	+	pepN	LU632_RS09930	0.62	-0.1
1,898,063	+	pepN	LU632_RS09930	0.62	+0.7
1,898,156	+	pepN	LU632_RS09930	0.66	-3.5
1,898,223	-	pepN	LU632_RS09930	0.68	-0.2
1,898,223	-	pepN	LU632_RS09930	0.68	-0.8
1,898,624	-	pepN	LU632_RS09930	0.84	+2.1
1,898,687	-	pepN	LU632_RS09930	0.86	+0.7
1,898,922	-				+0.2
1,898,942	+				+1.4
1,898,956	+				+0.3
1,899,167	+				-0.0
1,899,259	+				-1.5
1,899,259	+				+0.6
1,899,259	+				-2.0
1,899,260	-				-0.3
1,899,263	-				-0.1
1,899,263	-				+1.2
1,899,306	-				-0.4
1,899,336	-		LU632_RS09935	0.20	+0.2
1,899,370	-		LU632_RS09935	0.44	-1.0
1,899,378	+		LU632_RS09935	0.49	+1.7