Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS08645

Experiment: plant=Melon; plant sample=M5; plant location=P2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	plant=Melon; plant sample=M5; plant location=P2
1,618,154	-		LU632_RS08640	0.10	+0.7
1,618,698	-		LU632_RS08640	0.82	-0.1
1,618,849	+				+1.2
1,618,970	+				+0.9
1,618,974	+				-0.7
1,619,302	-		LU632_RS08645	0.13	-2.5
1,619,304	-		LU632_RS08645	0.13	-2.5
1,620,048	-		LU632_RS08645	0.70	+0.1
1,620,404	+				-0.8
1,620,405	-				-0.8
1,620,530	+				-0.3
1,620,572	+		LU632_RS08650	0.13	+0.3
1,620,593	+		LU632_RS08650	0.17	-0.0
1,620,593	+		LU632_RS08650	0.17	+0.7
1,620,594	-		LU632_RS08650	0.17	+0.7
1,620,595	+		LU632_RS08650	0.17	+1.7
1,620,595	+		LU632_RS08650	0.17	+1.4
1,620,595	+		LU632_RS08650	0.17	+0.1
1,620,595	+		LU632_RS08650	0.17	-0.9
1,620,596	-		LU632_RS08650	0.17	+0.7
1,620,596	-		LU632_RS08650	0.17	+1.7
1,620,596	-		LU632_RS08650	0.17	-2.5
1,620,596	-		LU632_RS08650	0.17	+1.7
1,620,596	-		LU632_RS08650	0.17	-0.8
1,620,596	-		LU632_RS08650	0.17	+0.1
1,620,709	-		LU632_RS08650	0.36	-0.8
1,620,885	+		LU632_RS08650	0.66	+1.3
1,620,956	+		LU632_RS08650	0.78	-0.7
1,620,956	+		LU632_RS08650	0.78	-0.8
1,620,956	+		LU632_RS08650	0.78	-0.7
1,620,960	-		LU632_RS08650	0.79	-0.9
1,620,977	+		LU632_RS08650	0.82	+2.4
1,620,978	-		LU632_RS08650	0.82	+1.8
1,620,978	-		LU632_RS08650	0.82	+0.9
1,621,033	+				-0.2
1,621,033	+				-1.3
1,621,034	-				+0.0
1,621,034	-				-0.0
1,621,034	-				-0.7
1,621,096	-				-0.8
1,621,135	-				-0.1
1,621,195	+				-0.9