Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS08615

Experiment: plant=Melon; plant sample=M5; plant location=P2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	plant=Melon; plant sample=M5; plant location=P2
1,614,863	+		LU632_RS08605	0.34	+1.1
1,614,864	-		LU632_RS08605	0.35	+0.1
1,614,898	+		LU632_RS08605	0.58	+0.6
1,614,898	+		LU632_RS08605	0.58	+1.0
1,614,943	-		LU632_RS08605	0.88	-0.8
1,615,024	-				-0.3
1,615,024	-				+0.7
1,615,033	-				+2.0
1,615,072	+				+1.0
1,615,185	-				-0.3
1,615,249	+		LU632_RS08610	0.18	-0.4
1,615,250	-		LU632_RS08610	0.19	+0.8
1,615,250	-		LU632_RS08610	0.19	+0.7
1,615,250	-		LU632_RS08610	0.19	-0.7
1,615,250	-		LU632_RS08610	0.19	-0.5
1,615,298	+		LU632_RS08610	0.26	-0.2
1,615,299	-		LU632_RS08610	0.26	-1.7
1,615,299	-		LU632_RS08610	0.26	+0.3
1,615,299	-		LU632_RS08610	0.26	+0.4
1,615,341	+		LU632_RS08610	0.32	+1.2
1,615,342	-		LU632_RS08610	0.32	-0.5
1,615,349	+		LU632_RS08610	0.33	+1.7
1,615,385	+		LU632_RS08610	0.39	+1.6
1,615,397	+		LU632_RS08610	0.40	+0.7
1,615,398	-		LU632_RS08610	0.41	-0.4
1,615,398	-		LU632_RS08610	0.41	-1.8
1,615,399	-		LU632_RS08610	0.41	+1.5
1,615,402	+		LU632_RS08610	0.41	+0.3
1,615,403	-		LU632_RS08610	0.41	+0.1
1,615,462	+		LU632_RS08610	0.50	+0.7
1,615,604	+		LU632_RS08610	0.71	+1.3
1,615,604	+		LU632_RS08610	0.71	+0.3
1,615,604	+		LU632_RS08610	0.71	+0.7
1,615,605	-		LU632_RS08610	0.71	+0.6
1,615,605	-		LU632_RS08610	0.71	+0.8
1,615,631	+		LU632_RS08610	0.75	+0.9
1,615,631	+		LU632_RS08610	0.75	+1.7
1,615,632	-		LU632_RS08610	0.75	-2.0
1,615,763	+				+1.1
1,615,763	+				-0.3
1,615,795	-				-2.6
1,615,800	+				+0.4
1,615,802	+				+0.6
1,615,807	-				+0.9
1,615,895	-		LU632_RS08615	0.28	-0.5
1,615,895	-		LU632_RS08615	0.28	+0.1
1,615,916	+		LU632_RS08615	0.34	-0.2
1,615,922	+		LU632_RS08615	0.36	+0.7
1,615,998	+		LU632_RS08615	0.59	+1.2
1,616,022	+		LU632_RS08615	0.66	+0.2
1,616,043	-		LU632_RS08615	0.73	+0.3
1,616,088	-		LU632_RS08615	0.87	-0.8
1,616,088	-		LU632_RS08615	0.87	-1.5
1,616,088	-		LU632_RS08615	0.87	+1.2
1,616,132	-				-0.0
1,616,132	-				+2.6
1,616,178	+				+1.7
1,616,179	-				-0.3
1,616,213	-				-0.8
1,616,233	-				+1.1
1,616,250	+				+0.1
1,616,255	-				-0.6
1,616,359	+				+0.8
1,616,359	+				-2.1
1,616,359	+				+3.2
1,616,388	-				+1.1
1,616,388	-				+1.3
1,616,388	-				+1.2
1,616,388	-				-1.3
1,616,461	-		LU632_RS08620	0.22	+0.1
1,616,461	-		LU632_RS08620	0.22	-0.3
1,616,475	-		LU632_RS08620	0.27	-1.3
1,616,631	+		LU632_RS08620	0.76	+0.3
1,616,631	+		LU632_RS08620	0.76	+0.7