Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS07735

Experiment: plant=Melon; plant sample=M5; plant location=P2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	plant=Melon; plant sample=M5; plant location=P2
1,443,707	-		LU632_RS07720	0.81	+0.6
1,443,722	+		LU632_RS07720	0.89	-0.2
1,443,722	+		LU632_RS07720	0.89	-4.0
1,443,723	-				-1.8
1,443,904	-		LU632_RS07725	0.23	+0.3
1,443,958	+		LU632_RS07725	0.31	+0.4
1,443,959	-		LU632_RS07725	0.31	+0.5
1,443,982	-		LU632_RS07725	0.34	-0.4
1,444,003	-		LU632_RS07725	0.37	-0.3
1,444,011	+		LU632_RS07725	0.38	-0.4
1,444,011	+		LU632_RS07725	0.38	-1.0
1,444,012	-		LU632_RS07725	0.39	-1.2
1,444,045	+		LU632_RS07725	0.43	-0.2
1,444,054	-		LU632_RS07725	0.45	+0.2
1,444,079	-		LU632_RS07725	0.48	+0.9
1,444,079	-		LU632_RS07725	0.48	+2.7
1,444,081	-		LU632_RS07725	0.48	+0.8
1,444,081	-		LU632_RS07725	0.48	-0.4
1,444,081	-		LU632_RS07725	0.48	+0.6
1,444,081	-		LU632_RS07725	0.48	-2.0
1,444,081	-		LU632_RS07725	0.48	+0.4
1,444,081	-		LU632_RS07725	0.48	+0.3
1,444,144	-		LU632_RS07725	0.58	-1.0
1,444,386	-				-0.7
1,444,433	+				-1.6
1,444,433	+				-0.1
1,444,434	-				+0.0
1,444,434	-				-0.8
1,444,454	-				-0.5
1,444,454	-				+1.8
1,444,454	-				+0.4
1,444,454	-				-1.0
1,444,454	-				-1.8
1,444,454	-				+1.2
1,444,454	-				-1.1
1,444,473	-		LU632_RS07730	0.19	+0.8
1,444,473	-		LU632_RS07730	0.19	+0.3
1,444,473	-		LU632_RS07730	0.19	-2.9
1,444,531	-		LU632_RS07730	0.46	-2.2
1,444,597	+		LU632_RS07730	0.78	-1.7
1,444,597	+		LU632_RS07730	0.78	+2.1
1,444,597	+		LU632_RS07730	0.78	+1.2
1,444,597	+		LU632_RS07730	0.78	-1.2
1,444,597	+		LU632_RS07730	0.78	-1.2
1,444,597	+		LU632_RS07730	0.78	+0.8
1,444,598	-		LU632_RS07730	0.78	+0.2
1,444,599	+		LU632_RS07730	0.79	-1.7
1,444,599	+		LU632_RS07730	0.79	+0.4
1,444,599	+		LU632_RS07730	0.79	-1.3
1,444,600	-		LU632_RS07730	0.79	+1.0
1,444,609	-		LU632_RS07730	0.83	+1.2
1,444,613	-		LU632_RS07730	0.85	+2.1
1,444,669	+				-0.1
1,444,676	-				-1.4
1,444,712	+		LU632_RS07735	0.16	+1.1
1,444,714	-		LU632_RS07735	0.17	+0.9
1,444,778	-		LU632_RS07735	0.32	+0.6
1,445,012	-		LU632_RS07735	0.87	-0.7
1,445,091	+				+0.1
1,445,092	-				+1.2
1,445,092	-				+0.9
1,445,158	-		LU632_RS07740	0.24	-1.8
1,445,356	+		LU632_RS07740	0.75	+0.6
1,445,356	+		LU632_RS07740	0.75	+0.9
1,445,513	+				-1.4
1,445,518	+				+0.6
1,445,527	+				-0.2
1,445,531	+				+1.1
1,445,532	-				-1.3
1,445,577	+				-0.1
1,445,586	+				+0.4
1,445,663	-		LU632_RS07745	0.12	-1.4
1,445,676	+		LU632_RS07745	0.15	-0.4
1,445,676	+		LU632_RS07745	0.15	+0.8
1,445,714	+		LU632_RS07745	0.24	+1.5
1,445,872	+		LU632_RS07745	0.60	-0.7
1,445,876	-		LU632_RS07745	0.61	+2.4
1,446,009	-				-1.2
1,446,009	-				-0.3
1,446,009	-				+2.6
1,446,009	-				+0.1