Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS07415

Experiment: plant=Melon; plant sample=M5; plant location=P2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	plant=Melon; plant sample=M5; plant location=P2
1,397,761	+				-0.2
1,397,761	+				+0.3
1,397,761	+				-1.3
1,397,761	+				-0.9
1,397,761	+				+0.6
1,397,766	-				-0.4
1,397,897	-				+0.4
1,397,910	+				+0.5
1,397,911	-				-0.0
1,397,934	+				-1.8
1,397,948	+				+0.4
1,398,024	+				-0.2
1,398,084	+				+0.5
1,398,132	+				-1.2
1,398,161	+				+1.1
1,398,162	-				+0.2
1,398,162	-				-0.5
1,398,176	+				-0.4
1,398,177	-				-1.6
1,398,233	+				+0.7
1,398,264	+				+2.6
1,398,264	+				+0.3
1,398,279	+				+0.6
1,398,280	-				+0.2
1,398,354	+				-0.0
1,398,354	+				+0.5
1,398,354	+				+0.1
1,398,354	+				+0.3
1,398,356	+				+0.1
1,398,357	-				+1.7
1,398,430	+				+0.4
1,398,514	-				+0.7
1,398,516	-				-0.7
1,398,535	+				-1.0
1,398,535	+				+0.5
1,398,535	+				+1.3
1,398,536	-				-0.2
1,398,536	-				-1.1
1,398,536	-				+0.3
1,398,536	-				+0.3
1,398,578	-				+1.2
1,398,587	+				+2.2
1,398,619	-				+2.1
1,398,698	+		LU632_RS07415	0.22	-0.1
1,398,727	+		LU632_RS07415	0.27	+0.6
1,398,727	+		LU632_RS07415	0.27	-0.7
1,398,727	+		LU632_RS07415	0.27	-1.4
1,398,730	-		LU632_RS07415	0.27	+1.2
1,398,751	+		LU632_RS07415	0.31	+0.0
1,398,751	+		LU632_RS07415	0.31	-1.0
1,398,755	+		LU632_RS07415	0.31	-1.2
1,398,788	+		LU632_RS07415	0.37	-0.7
1,398,788	+		LU632_RS07415	0.37	-1.2
1,398,789	-		LU632_RS07415	0.37	-0.4
1,398,789	-		LU632_RS07415	0.37	+0.7
1,398,964	+		LU632_RS07415	0.66	-0.5
1,399,011	-		LU632_RS07415	0.74	+0.6
1,399,011	-		LU632_RS07415	0.74	-0.1
1,399,120	+				+0.4
1,399,177	+				-0.6
1,399,891	+		LU632_RS07420	0.29	-1.1
1,399,891	+		LU632_RS07420	0.29	-0.2
1,399,891	+		LU632_RS07420	0.29	+1.1
1,399,891	+		LU632_RS07420	0.29	-1.1
1,399,891	+		LU632_RS07420	0.29	-0.9
1,399,891	+		LU632_RS07420	0.29	+1.2
1,399,892	-		LU632_RS07420	0.29	-0.4
1,399,892	-		LU632_RS07420	0.29	+0.0
1,399,892	-		LU632_RS07420	0.29	+0.1
1,399,892	-		LU632_RS07420	0.29	+1.6
1,399,892	-		LU632_RS07420	0.29	+0.6
1,399,898	+		LU632_RS07420	0.29	-1.3
1,399,898	+		LU632_RS07420	0.29	-0.7
1,399,898	+		LU632_RS07420	0.29	+0.3
1,399,898	+		LU632_RS07420	0.29	-1.5
1,399,899	-		LU632_RS07420	0.29	-1.3
1,399,899	-		LU632_RS07420	0.29	+1.0
1,399,899	-		LU632_RS07420	0.29	+0.6
1,399,923	+		LU632_RS07420	0.31	+0.4
1,399,943	+		LU632_RS07420	0.32	+0.1
1,399,944	-		LU632_RS07420	0.32	+0.4
1,400,058	-		LU632_RS07420	0.38	-2.2
1,400,058	-		LU632_RS07420	0.38	-0.7