Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS07410

Experiment: plant=Melon; plant sample=M5; plant location=P2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	plant=Melon; plant sample=M5; plant location=P2
1,395,901	+		LU632_RS07400	0.37	+0.6
1,395,901	+		LU632_RS07400	0.37	+1.9
1,395,901	+		LU632_RS07400	0.37	+0.2
1,395,902	-		LU632_RS07400	0.38	-0.4
1,395,931	+		LU632_RS07400	0.42	-2.3
1,396,021	-		LU632_RS07400	0.58	-1.5
1,396,084	+		LU632_RS07400	0.68	-0.4
1,396,085	-		LU632_RS07400	0.69	-2.7
1,396,193	-		LU632_RS07400	0.87	-0.4
1,396,197	+		LU632_RS07400	0.87	-1.2
1,396,197	+		LU632_RS07400	0.87	+0.8
1,396,197	+		LU632_RS07400	0.87	+0.3
1,396,197	+		LU632_RS07400	0.87	+2.9
1,396,197	+		LU632_RS07400	0.87	-0.9
1,396,197	+		LU632_RS07400	0.87	+0.6
1,396,197	+		LU632_RS07400	0.87	-0.2
1,396,198	-		LU632_RS07400	0.88	+1.2
1,396,198	-		LU632_RS07400	0.88	-0.0
1,396,198	-		LU632_RS07400	0.88	+1.3
1,396,198	-		LU632_RS07400	0.88	+0.5
1,396,422	+				+0.6
1,396,422	+				-1.7
1,396,422	+				-0.7
1,396,423	-				+0.5
1,396,423	-				+1.2
1,396,452	-				-0.7
1,396,452	-				+1.2
1,396,452	-				-1.2
1,397,761	+				-0.2
1,397,761	+				+0.3
1,397,761	+				-1.3
1,397,761	+				-0.9
1,397,761	+				+0.6
1,397,766	-				-0.4
1,397,897	-				+0.4
1,397,910	+				+0.5
1,397,911	-				-0.0
1,397,934	+				-1.8
1,397,948	+				+0.4
1,398,024	+				-0.2
1,398,084	+				+0.5
1,398,132	+				-1.2
1,398,161	+				+1.1
1,398,162	-				+0.2
1,398,162	-				-0.5
1,398,176	+				-0.4
1,398,177	-				-1.6
1,398,233	+				+0.7
1,398,264	+				+2.6
1,398,264	+				+0.3
1,398,279	+				+0.6
1,398,280	-				+0.2
1,398,354	+				-0.0
1,398,354	+				+0.5
1,398,354	+				+0.1
1,398,354	+				+0.3
1,398,356	+				+0.1
1,398,357	-				+1.7
1,398,430	+				+0.4
1,398,514	-				+0.7
1,398,516	-				-0.7
1,398,535	+				-1.0
1,398,535	+				+0.5
1,398,535	+				+1.3
1,398,536	-				-0.2
1,398,536	-				-1.1
1,398,536	-				+0.3
1,398,536	-				+0.3
1,398,578	-				+1.2
1,398,587	+				+2.2
1,398,619	-				+2.1