Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS06640

Experiment: plant=Melon; plant sample=M5; plant location=P2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	plant=Melon; plant sample=M5; plant location=P2
1,274,745	+	zipA	LU632_RS06635	0.56	+0.6
1,274,899	+	zipA	LU632_RS06635	0.73	-0.7
1,274,899	+	zipA	LU632_RS06635	0.73	-4.5
1,274,995	+	zipA	LU632_RS06635	0.83	-3.0
1,275,034	+	zipA	LU632_RS06635	0.88	-1.6
1,275,107	+				-2.5
1,275,167	+				-0.3
1,277,301	-		LU632_RS06645	0.25	+0.2
1,277,336	+		LU632_RS06645	0.41	-0.2
1,277,337	-		LU632_RS06645	0.41	-1.0
1,277,337	-		LU632_RS06645	0.41	+0.6
1,277,337	-		LU632_RS06645	0.41	-0.0
1,277,340	+		LU632_RS06645	0.43	-1.2
1,277,340	+		LU632_RS06645	0.43	+1.3
1,277,341	-		LU632_RS06645	0.43	+1.2
1,277,341	-		LU632_RS06645	0.43	+0.6
1,277,483	+				+0.6
1,278,204	-		LU632_RS06650	0.58	+1.3
1,278,204	-		LU632_RS06650	0.58	-0.7