Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS06100

Experiment: plant=Melon; plant sample=M5; plant location=P2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	plant=Melon; plant sample=M5; plant location=P2
1,161,703	-				+0.0
1,161,872	-	mutH	LU632_RS06095	0.25	-0.7
1,161,890	+	mutH	LU632_RS06095	0.28	-2.1
1,161,891	-	mutH	LU632_RS06095	0.28	-2.1
1,162,049	+	mutH	LU632_RS06095	0.51	-1.0
1,162,138	+	mutH	LU632_RS06095	0.64	-0.6
1,162,138	+	mutH	LU632_RS06095	0.64	-0.2
1,162,227	-	mutH	LU632_RS06095	0.77	-0.2
1,162,515	+				+0.2
1,162,516	-				-0.5
1,162,628	-				-1.3
1,162,746	-		LU632_RS06100	0.24	-1.9
1,163,547	-				-0.1
1,163,586	+				+2.2
1,163,600	+				+2.2
1,163,600	+				+2.5
1,163,601	-				+2.1
1,163,601	-				+2.1
1,163,601	-				-1.2
1,163,748	+				+0.6
1,163,752	-				+3.1
1,163,888	+	ptsP	LU632_RS06110	0.13	+1.7
1,163,888	+	ptsP	LU632_RS06110	0.13	+2.0
1,163,889	-	ptsP	LU632_RS06110	0.13	+1.2
1,163,889	-	ptsP	LU632_RS06110	0.13	+3.2
1,163,889	-	ptsP	LU632_RS06110	0.13	+5.7
1,163,892	+	ptsP	LU632_RS06110	0.13	+3.3
1,163,892	-	ptsP	LU632_RS06110	0.13	+4.1
1,163,893	-	ptsP	LU632_RS06110	0.13	+1.8
1,163,893	-	ptsP	LU632_RS06110	0.13	-0.6
1,163,893	-	ptsP	LU632_RS06110	0.13	+1.5