Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS05385

Experiment: plant=Melon; plant sample=M5; plant location=P2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	plant=Melon; plant sample=M5; plant location=P2
1,038,440	+				+1.8
1,038,478	+				-0.9
1,038,479	-				+1.6
1,038,479	-				+0.0
1,038,479	-				+0.6
1,038,481	+				-0.8
1,038,481	+				-0.8
1,038,482	-				+0.3
1,038,482	-				+0.3
1,038,482	-				+0.8
1,038,505	-				+0.4
1,038,515	+				+1.8
1,038,525	-				+0.7
1,038,546	-				+1.7
1,038,587	-				+2.2
1,038,653	-				-0.9
1,038,667	+				-0.7
1,038,752	+				+1.0
1,038,753	-				+2.1
1,038,781	-				-0.2
1,038,863	-				+1.2
1,038,886	+				+0.7
1,038,886	+				-3.0
1,038,886	+				-1.4
1,038,890	+				-2.2
1,038,890	+				-0.8
1,038,942	+				-0.1
1,038,943	-				-0.5
1,039,426	-		LU632_RS05385	0.28	-2.0
1,039,437	+		LU632_RS05385	0.30	-0.3
1,039,691	-		LU632_RS05385	0.66	-1.3
1,040,078	-				-0.9
1,040,202	+				-0.7
1,040,203	-				+0.3
1,040,203	-				-0.1
1,040,203	-				-1.9
1,040,203	-				-0.6
1,040,204	+				+1.8
1,040,218	-				-0.3
1,040,333	+				-1.1
1,040,395	-				-1.6
1,040,430	-				-1.2
1,040,430	-				-1.8
1,040,456	+				-1.0
1,040,456	-				-1.2
1,040,457	-				-0.8
1,040,457	-				-0.6
1,040,459	-				+0.0
1,040,459	-				-3.0
1,040,490	+				-1.6
1,040,501	-				-2.8
1,040,635	+				-1.1
1,040,639	+				-1.5
1,040,639	+				-1.8
1,040,696	+				-1.2
1,040,718	-				-2.0
1,040,795	+				-2.0