Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS04650

Experiment: plant=Melon; plant sample=M5; plant location=P2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	plant=Melon; plant sample=M5; plant location=P2
909,319	+	glk	LU632_RS04645	0.83	+0.6
909,319	+	glk	LU632_RS04645	0.83	-0.9
909,320	-	glk	LU632_RS04645	0.83	-2.4
909,320	-	glk	LU632_RS04645	0.83	+0.0
909,323	-	glk	LU632_RS04645	0.83	-1.2
909,345	+	glk	LU632_RS04645	0.85	-1.3
909,477	+				+2.0
909,478	-				-0.7
909,488	+				-0.1
909,489	-				-1.4
909,490	+				-1.0
909,592	+				+0.6
909,626	-				+0.7
909,629	+				-0.6
909,629	+				+1.5
909,629	+				+0.4
909,629	+				+0.4
909,629	+				+0.4
909,629	+				-0.2
909,629	+				+2.7
909,629	+				+0.5
909,629	+				+1.6
909,629	+				-0.3
909,629	+				+2.1
909,632	-				-0.2
909,633	+				+0.6
909,633	+				-0.4
909,644	-				-0.1
909,785	+				-0.8
909,860	+				+2.3
909,926	+				-1.0
909,927	-				+0.1
909,950	+				-2.5
909,969	+				-1.0
909,969	+				-1.4
909,973	+				-3.4
909,974	-				+0.4
909,993	+				+2.0
909,993	+				-1.0
910,073	-				-0.7
910,093	+				+2.5
910,093	+				+0.2
910,094	-				+1.8
910,171	+				+0.3
910,172	-				-0.4
910,272	-		LU632_RS04650	0.15	+0.6
910,423	+		LU632_RS04650	0.47	-1.9
910,473	-		LU632_RS04650	0.58	-1.2
910,482	-		LU632_RS04650	0.60	-0.4
910,670	+				+0.0
910,671	-				+1.5
910,680	+				-1.2
910,716	-				+0.1
911,509	+				-0.4
911,572	+				-0.4
911,572	+				+2.0
911,572	+				-3.2
911,572	+				+0.0
911,573	-				+1.5
911,573	-				+1.0
911,573	-				+0.3