Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS03735

Experiment: plant=Melon; plant sample=M5; plant location=P2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	plant=Melon; plant sample=M5; plant location=P2
744,786	+				+0.1
744,901	-		LU632_RS03730	0.23	+1.5
744,969	-		LU632_RS03730	0.50	-1.6
745,062	-		LU632_RS03730	0.86	+0.4
745,062	-		LU632_RS03730	0.86	-1.4
745,062	-		LU632_RS03730	0.86	-0.5
745,127	-				-0.1
745,134	+				+1.2
745,140	-				-1.4
745,161	+				-0.1
745,165	+				+1.3
745,166	-				-0.5
745,178	+				-0.8
745,178	+				+1.5
745,179	-				-0.8
745,239	+		LU632_RS03735	0.20	+1.0
745,239	+		LU632_RS03735	0.20	-1.1
745,239	+		LU632_RS03735	0.20	+1.4
745,260	+		LU632_RS03735	0.28	-2.3
745,646	-				-0.5
745,658	+				-2.6
745,658	+				+1.5
745,711	-				+0.5
745,731	+				+1.3
746,090	-		LU632_RS03745	0.32	+0.5
746,159	+		LU632_RS03745	0.46	-1.0
746,393	+				-0.6
746,394	-				+2.0
746,449	-				-0.6