Experiment: Matrix:KB soft agar;Phage:inactivated cocktail;Temp:28;Samp:31-8
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt OLJFJH_17815 and OLJFJH_17820 are separated by 226 nucleotides OLJFJH_17820 and OLJFJH_17825 are separated by 160 nucleotides OLJFJH_17825 and OLJFJH_17830 are separated by 67 nucleotides
OLJFJH_17815: OLJFJH_17815 - DNA polymerase III subunit gamma/tau, at 3,744,695 to 3,746,626
_17815
OLJFJH_17820: OLJFJH_17820 - adenine phosphoribosyltransferase, at 3,746,853 to 3,747,404
_17820
OLJFJH_17825: OLJFJH_17825 - DUF454 domain-containing protein, at 3,747,565 to 3,747,936
_17825
OLJFJH_17830: OLJFJH_17830 - prephenate dehydrogenase, at 3,748,004 to 3,748,540
_17830
Position (kb) 3746
3747
3748 Strain fitness (log2 ratio) -1
0
1 at 3746.692 kb on - strand at 3746.879 kb on + strand at 3746.881 kb on + strand at 3746.936 kb on + strand, within OLJFJH_17820 at 3746.940 kb on - strand, within OLJFJH_17820 at 3747.043 kb on - strand, within OLJFJH_17820 at 3747.043 kb on - strand, within OLJFJH_17820 at 3747.106 kb on + strand, within OLJFJH_17820 at 3747.225 kb on + strand, within OLJFJH_17820 at 3747.236 kb on + strand, within OLJFJH_17820 at 3747.237 kb on - strand, within OLJFJH_17820 at 3747.237 kb on - strand, within OLJFJH_17820 at 3747.258 kb on + strand, within OLJFJH_17820 at 3747.258 kb on + strand, within OLJFJH_17820 at 3747.258 kb on + strand, within OLJFJH_17820 at 3747.259 kb on - strand, within OLJFJH_17820 at 3747.259 kb on - strand, within OLJFJH_17820 at 3747.405 kb on - strand at 3747.610 kb on - strand, within OLJFJH_17825 at 3747.687 kb on + strand, within OLJFJH_17825 at 3747.842 kb on - strand, within OLJFJH_17825 at 3747.892 kb on + strand, within OLJFJH_17825 at 3747.892 kb on + strand, within OLJFJH_17825 at 3747.892 kb on + strand, within OLJFJH_17825 at 3748.161 kb on + strand, within OLJFJH_17830
Per-strain Table
Position Strand Gene LocusTag Fraction Matrix:KB soft agar;Phage:inactivated cocktail;Temp:28;Samp:31-8 remove 3,746,692 - +0.1 3,746,879 + +0.4 3,746,881 + -0.4 3,746,936 + OLJFJH_17820 0.15 +0.5 3,746,940 - OLJFJH_17820 0.16 -1.2 3,747,043 - OLJFJH_17820 0.34 -0.2 3,747,043 - OLJFJH_17820 0.34 +0.2 3,747,106 + OLJFJH_17820 0.46 +0.0 3,747,225 + OLJFJH_17820 0.67 -0.2 3,747,236 + OLJFJH_17820 0.69 -1.3 3,747,237 - OLJFJH_17820 0.70 -1.5 3,747,237 - OLJFJH_17820 0.70 -0.0 3,747,258 + OLJFJH_17820 0.73 +0.5 3,747,258 + OLJFJH_17820 0.73 +0.2 3,747,258 + OLJFJH_17820 0.73 -0.0 3,747,259 - OLJFJH_17820 0.74 -0.1 3,747,259 - OLJFJH_17820 0.74 -0.2 3,747,405 - +0.1 3,747,610 - OLJFJH_17825 0.12 +0.7 3,747,687 + OLJFJH_17825 0.33 -0.7 3,747,842 - OLJFJH_17825 0.74 -0.5 3,747,892 + OLJFJH_17825 0.88 +1.1 3,747,892 + OLJFJH_17825 0.88 -0.1 3,747,892 + OLJFJH_17825 0.88 -0.2 3,748,161 + OLJFJH_17830 0.29 -0.1
Or see this region's nucleotide sequence