Strain Fitness in Erwinia amylovora T8 around OLJFJH_17770

Experiment: Matrix:KB soft agar;Phage:inactivated cocktail;Temp:28;Samp:31-8

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntOLJFJH_17765 and OLJFJH_17770 are separated by 117 nucleotidesOLJFJH_17770 and OLJFJH_17775 are separated by 93 nucleotidesOLJFJH_17775 and OLJFJH_17780 overlap by 4 nucleotides OLJFJH_17765: OLJFJH_17765 - ferrochelatase, at 3,735,599 to 3,736,558 _17765 OLJFJH_17770: OLJFJH_17770 - adenylate kinase, at 3,736,676 to 3,737,320 _17770 OLJFJH_17775: OLJFJH_17775 - EamA-like transporter family, at 3,737,414 to 3,738,316 _17775 OLJFJH_17780: OLJFJH_17780 - DUF6024 domain-containing protein, at 3,738,313 to 3,739,188 _17780 Position (kb) 3736 3737 3738Strain fitness (log2 ratio) -1 0 1 2at 3736.563 kb on - strandat 3737.461 kb on - strandat 3737.462 kb on + strandat 3737.544 kb on + strand, within OLJFJH_17775at 3737.544 kb on + strand, within OLJFJH_17775at 3737.544 kb on + strand, within OLJFJH_17775at 3737.544 kb on + strand, within OLJFJH_17775at 3737.545 kb on - strand, within OLJFJH_17775at 3737.621 kb on + strand, within OLJFJH_17775at 3737.621 kb on + strand, within OLJFJH_17775at 3737.626 kb on + strand, within OLJFJH_17775at 3737.626 kb on + strand, within OLJFJH_17775at 3737.626 kb on + strand, within OLJFJH_17775at 3737.626 kb on + strand, within OLJFJH_17775at 3737.627 kb on - strand, within OLJFJH_17775at 3737.627 kb on - strand, within OLJFJH_17775at 3737.627 kb on - strand, within OLJFJH_17775at 3737.627 kb on - strand, within OLJFJH_17775at 3737.630 kb on + strand, within OLJFJH_17775at 3737.631 kb on - strand, within OLJFJH_17775at 3737.631 kb on - strand, within OLJFJH_17775at 3737.809 kb on + strand, within OLJFJH_17775at 3737.897 kb on - strand, within OLJFJH_17775at 3737.897 kb on - strand, within OLJFJH_17775at 3738.100 kb on + strand, within OLJFJH_17775at 3738.101 kb on - strand, within OLJFJH_17775at 3738.296 kb on + strandat 3738.296 kb on + strandat 3738.297 kb on - strandat 3738.297 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Matrix:KB soft agar;Phage:inactivated cocktail;Temp:28;Samp:31-8
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3,736,563 - +0.5
3,737,461 - -1.3
3,737,462 + +1.4
3,737,544 + OLJFJH_17775 0.14 -1.5
3,737,544 + OLJFJH_17775 0.14 +1.1
3,737,544 + OLJFJH_17775 0.14 +0.4
3,737,544 + OLJFJH_17775 0.14 -0.3
3,737,545 - OLJFJH_17775 0.15 +0.7
3,737,621 + OLJFJH_17775 0.23 +1.0
3,737,621 + OLJFJH_17775 0.23 +0.8
3,737,626 + OLJFJH_17775 0.23 +2.3
3,737,626 + OLJFJH_17775 0.23 +1.8
3,737,626 + OLJFJH_17775 0.23 +0.8
3,737,626 + OLJFJH_17775 0.23 -0.2
3,737,627 - OLJFJH_17775 0.24 +1.6
3,737,627 - OLJFJH_17775 0.24 +0.0
3,737,627 - OLJFJH_17775 0.24 +0.1
3,737,627 - OLJFJH_17775 0.24 +1.3
3,737,630 + OLJFJH_17775 0.24 +1.1
3,737,631 - OLJFJH_17775 0.24 -0.5
3,737,631 - OLJFJH_17775 0.24 +0.6
3,737,809 + OLJFJH_17775 0.44 +0.4
3,737,897 - OLJFJH_17775 0.53 +2.3
3,737,897 - OLJFJH_17775 0.53 +0.9
3,738,100 + OLJFJH_17775 0.76 +1.5
3,738,101 - OLJFJH_17775 0.76 +0.4
3,738,296 + -0.7
3,738,296 + +0.2
3,738,297 - +1.9
3,738,297 - +2.4

Or see this region's nucleotide sequence