Strain Fitness in Erwinia amylovora T8 around OLJFJH_17760

Experiment: Matrix:KB soft agar;Phage:inactivated cocktail;Temp:28;Samp:31-8

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntOLJFJH_17750 and OLJFJH_17755 are separated by 192 nucleotidesOLJFJH_17755 and OLJFJH_17760 are separated by 226 nucleotidesOLJFJH_17760 and OLJFJH_17765 are separated by 97 nucleotides OLJFJH_17750: OLJFJH_17750 - Kef family K(+) transporter, at 3,731,550 to 3,733,235 _17750 OLJFJH_17755: OLJFJH_17755 - hypothetical protein, at 3,733,428 to 3,733,970 _17755 OLJFJH_17760: OLJFJH_17760 - inosine/guanosine kinase, at 3,734,197 to 3,735,501 _17760 OLJFJH_17765: OLJFJH_17765 - ferrochelatase, at 3,735,599 to 3,736,558 _17765 Position (kb) 3734 3735 3736Strain fitness (log2 ratio) -2 -1 0 1at 3733.233 kb on + strandat 3733.387 kb on + strandat 3733.680 kb on + strand, within OLJFJH_17755at 3733.704 kb on + strand, within OLJFJH_17755at 3733.780 kb on - strand, within OLJFJH_17755at 3733.891 kb on - strand, within OLJFJH_17755at 3733.908 kb on + strand, within OLJFJH_17755at 3734.159 kb on - strandat 3734.181 kb on + strandat 3734.181 kb on + strandat 3734.182 kb on - strandat 3734.182 kb on - strandat 3734.185 kb on + strandat 3734.185 kb on + strandat 3734.185 kb on + strandat 3734.185 kb on + strandat 3734.186 kb on - strandat 3734.211 kb on - strandat 3734.285 kb on + strandat 3734.303 kb on + strandat 3734.304 kb on - strandat 3734.304 kb on - strandat 3734.307 kb on + strandat 3734.307 kb on + strandat 3734.307 kb on + strandat 3734.308 kb on - strandat 3734.308 kb on - strandat 3734.308 kb on - strandat 3734.308 kb on - strandat 3734.330 kb on + strand, within OLJFJH_17760at 3734.330 kb on + strand, within OLJFJH_17760at 3734.331 kb on - strand, within OLJFJH_17760at 3734.331 kb on - strand, within OLJFJH_17760at 3734.339 kb on + strand, within OLJFJH_17760at 3734.340 kb on - strand, within OLJFJH_17760at 3734.340 kb on - strand, within OLJFJH_17760at 3734.474 kb on + strand, within OLJFJH_17760at 3734.474 kb on + strand, within OLJFJH_17760at 3734.475 kb on - strand, within OLJFJH_17760at 3734.628 kb on + strand, within OLJFJH_17760at 3734.628 kb on + strand, within OLJFJH_17760at 3734.629 kb on - strand, within OLJFJH_17760at 3734.629 kb on - strand, within OLJFJH_17760at 3734.630 kb on + strand, within OLJFJH_17760at 3734.630 kb on + strand, within OLJFJH_17760at 3734.630 kb on + strand, within OLJFJH_17760at 3734.630 kb on + strand, within OLJFJH_17760at 3734.630 kb on + strand, within OLJFJH_17760at 3734.630 kb on + strand, within OLJFJH_17760at 3734.630 kb on + strand, within OLJFJH_17760at 3734.630 kb on + strand, within OLJFJH_17760at 3734.630 kb on + strand, within OLJFJH_17760at 3734.631 kb on - strand, within OLJFJH_17760at 3734.631 kb on - strand, within OLJFJH_17760at 3734.631 kb on - strand, within OLJFJH_17760at 3734.631 kb on - strand, within OLJFJH_17760at 3734.631 kb on - strand, within OLJFJH_17760at 3734.631 kb on - strand, within OLJFJH_17760at 3734.631 kb on - strand, within OLJFJH_17760at 3734.631 kb on - strand, within OLJFJH_17760at 3734.631 kb on - strand, within OLJFJH_17760at 3734.652 kb on + strand, within OLJFJH_17760at 3734.653 kb on - strand, within OLJFJH_17760at 3734.659 kb on + strand, within OLJFJH_17760at 3734.811 kb on - strand, within OLJFJH_17760at 3734.811 kb on - strand, within OLJFJH_17760at 3734.811 kb on - strand, within OLJFJH_17760at 3734.811 kb on - strand, within OLJFJH_17760at 3734.918 kb on + strand, within OLJFJH_17760at 3734.919 kb on - strand, within OLJFJH_17760at 3734.919 kb on - strand, within OLJFJH_17760at 3735.033 kb on + strand, within OLJFJH_17760at 3735.043 kb on - strand, within OLJFJH_17760at 3735.076 kb on + strand, within OLJFJH_17760at 3735.081 kb on - strand, within OLJFJH_17760at 3735.081 kb on - strand, within OLJFJH_17760at 3735.202 kb on - strand, within OLJFJH_17760at 3735.210 kb on + strand, within OLJFJH_17760at 3735.210 kb on + strand, within OLJFJH_17760at 3735.467 kb on + strandat 3735.481 kb on - strandat 3735.481 kb on - strandat 3735.539 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Matrix:KB soft agar;Phage:inactivated cocktail;Temp:28;Samp:31-8
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3,733,233 + -0.1
3,733,387 + +0.1
3,733,680 + OLJFJH_17755 0.46 +0.3
3,733,704 + OLJFJH_17755 0.51 +0.6
3,733,780 - OLJFJH_17755 0.65 -1.0
3,733,891 - OLJFJH_17755 0.85 +0.0
3,733,908 + OLJFJH_17755 0.88 -0.3
3,734,159 - -0.5
3,734,181 + -1.0
3,734,181 + -0.1
3,734,182 - -1.0
3,734,182 - -0.5
3,734,185 + -0.3
3,734,185 + -0.5
3,734,185 + -0.8
3,734,185 + -2.3
3,734,186 - +0.4
3,734,211 - -0.5
3,734,285 + -0.7
3,734,303 + -0.2
3,734,304 - -1.0
3,734,304 - +0.2
3,734,307 + -0.1
3,734,307 + -0.4
3,734,307 + -0.4
3,734,308 - -2.3
3,734,308 - +0.4
3,734,308 - +0.2
3,734,308 - -0.5
3,734,330 + OLJFJH_17760 0.10 -0.3
3,734,330 + OLJFJH_17760 0.10 -0.2
3,734,331 - OLJFJH_17760 0.10 +0.1
3,734,331 - OLJFJH_17760 0.10 +0.0
3,734,339 + OLJFJH_17760 0.11 +0.7
3,734,340 - OLJFJH_17760 0.11 -1.4
3,734,340 - OLJFJH_17760 0.11 -0.9
3,734,474 + OLJFJH_17760 0.21 -0.4
3,734,474 + OLJFJH_17760 0.21 -1.1
3,734,475 - OLJFJH_17760 0.21 -1.3
3,734,628 + OLJFJH_17760 0.33 -0.9
3,734,628 + OLJFJH_17760 0.33 -0.7
3,734,629 - OLJFJH_17760 0.33 -0.4
3,734,629 - OLJFJH_17760 0.33 -0.3
3,734,630 + OLJFJH_17760 0.33 -1.0
3,734,630 + OLJFJH_17760 0.33 -0.7
3,734,630 + OLJFJH_17760 0.33 -0.0
3,734,630 + OLJFJH_17760 0.33 -1.0
3,734,630 + OLJFJH_17760 0.33 +0.7
3,734,630 + OLJFJH_17760 0.33 -0.2
3,734,630 + OLJFJH_17760 0.33 -1.3
3,734,630 + OLJFJH_17760 0.33 +0.4
3,734,630 + OLJFJH_17760 0.33 +0.1
3,734,631 - OLJFJH_17760 0.33 -0.2
3,734,631 - OLJFJH_17760 0.33 -0.6
3,734,631 - OLJFJH_17760 0.33 -0.3
3,734,631 - OLJFJH_17760 0.33 +0.6
3,734,631 - OLJFJH_17760 0.33 +0.1
3,734,631 - OLJFJH_17760 0.33 +0.2
3,734,631 - OLJFJH_17760 0.33 -0.5
3,734,631 - OLJFJH_17760 0.33 -0.9
3,734,631 - OLJFJH_17760 0.33 -0.3
3,734,652 + OLJFJH_17760 0.35 -0.1
3,734,653 - OLJFJH_17760 0.35 -0.4
3,734,659 + OLJFJH_17760 0.35 -2.0
3,734,811 - OLJFJH_17760 0.47 +0.3
3,734,811 - OLJFJH_17760 0.47 -0.5
3,734,811 - OLJFJH_17760 0.47 +1.2
3,734,811 - OLJFJH_17760 0.47 +0.1
3,734,918 + OLJFJH_17760 0.55 -0.2
3,734,919 - OLJFJH_17760 0.55 -0.8
3,734,919 - OLJFJH_17760 0.55 -0.6
3,735,033 + OLJFJH_17760 0.64 -0.1
3,735,043 - OLJFJH_17760 0.65 -0.0
3,735,076 + OLJFJH_17760 0.67 -0.5
3,735,081 - OLJFJH_17760 0.68 +0.4
3,735,081 - OLJFJH_17760 0.68 +1.4
3,735,202 - OLJFJH_17760 0.77 -0.8
3,735,210 + OLJFJH_17760 0.78 +0.2
3,735,210 + OLJFJH_17760 0.78 -0.8
3,735,467 + -0.7
3,735,481 - -0.7
3,735,481 - +0.5
3,735,539 + -0.0

Or see this region's nucleotide sequence