Strain Fitness in Erwinia amylovora T8 around OLJFJH_14240

Experiment: Matrix:KB soft agar;Phage:inactivated cocktail;Temp:28;Samp:31-8

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Matrix:KB soft agar;Phage:inactivated cocktail;Temp:28;Samp:31-8
3,007,716	+		OLJFJH_14235	0.74	-1.6
3,007,716	+		OLJFJH_14235	0.74	+0.8
3,007,717	-		OLJFJH_14235	0.74	-1.1
3,007,863	+		OLJFJH_14235	0.81	-0.1
3,007,863	+		OLJFJH_14235	0.81	+1.4
3,008,003	+		OLJFJH_14235	0.87	-1.0
3,008,004	-		OLJFJH_14235	0.87	-1.2
3,008,043	+		OLJFJH_14235	0.89	+0.7
3,008,043	+		OLJFJH_14235	0.89	+0.1
3,008,043	+		OLJFJH_14235	0.89	-0.9
3,008,044	-		OLJFJH_14235	0.89	-0.1
3,008,044	-		OLJFJH_14235	0.89	-0.5
3,008,315	+				-0.2
3,008,315	+				-1.3
3,008,315	+				+0.2
3,008,316	-				+0.6
3,008,352	+				-0.2
3,008,361	+				-1.6
3,008,628	+				+0.6
3,008,628	+				-1.0
3,008,660	-				+0.2
3,008,660	-				+1.5
3,008,722	+		OLJFJH_14240	0.15	+0.1
3,008,722	+		OLJFJH_14240	0.15	-0.2
3,008,723	-		OLJFJH_14240	0.15	-0.1
3,008,723	-		OLJFJH_14240	0.15	-0.0
3,008,727	-		OLJFJH_14240	0.15	-0.4
3,008,796	+		OLJFJH_14240	0.20	+0.4
3,008,823	-		OLJFJH_14240	0.22	-0.2
3,008,850	+		OLJFJH_14240	0.24	-0.2
3,008,926	+		OLJFJH_14240	0.30	-0.0
3,008,926	+		OLJFJH_14240	0.30	+0.1
3,009,059	+		OLJFJH_14240	0.40	+0.0
3,009,060	-		OLJFJH_14240	0.40	-0.6
3,009,242	+		OLJFJH_14240	0.54	+0.4
3,009,242	+		OLJFJH_14240	0.54	+0.3
3,009,258	+		OLJFJH_14240	0.55	+1.2
3,009,258	+		OLJFJH_14240	0.55	+0.2
3,009,421	+		OLJFJH_14240	0.68	+1.2
3,009,422	-		OLJFJH_14240	0.68	+0.5
3,009,422	-		OLJFJH_14240	0.68	-0.1
3,009,537	+		OLJFJH_14240	0.76	-0.5
3,009,537	+		OLJFJH_14240	0.76	-0.3
3,009,537	+		OLJFJH_14240	0.76	-1.1
3,009,537	+		OLJFJH_14240	0.76	+1.7
3,009,537	+		OLJFJH_14240	0.76	-0.2
3,009,538	-		OLJFJH_14240	0.77	-0.5
3,009,538	-		OLJFJH_14240	0.77	+0.3
3,009,538	-		OLJFJH_14240	0.77	+0.3
3,009,606	+		OLJFJH_14240	0.82	+1.8
3,009,634	+		OLJFJH_14240	0.84	-0.2
3,009,792	+				+0.5
3,009,793	-				-0.3
3,009,832	-				+0.1
3,009,832	-				+3.7
3,009,847	-				+0.1
3,009,952	-				-0.3
3,009,970	+				+0.1
3,010,067	-		OLJFJH_14245	0.55	+0.0
3,010,081	-		OLJFJH_14245	0.63	-0.1
3,010,133	-				-0.4
3,010,142	+				-0.8
3,010,143	-				+1.6
3,010,148	-				-0.4
3,010,159	+				+0.5
3,010,162	+				-0.4
3,010,185	+				-0.0
3,010,232	+				-0.5
3,010,232	+				+0.3
3,010,454	+		OLJFJH_14250	0.31	+0.3
3,010,454	+		OLJFJH_14250	0.31	+0.3
3,010,455	-		OLJFJH_14250	0.31	+0.8
3,010,558	+		OLJFJH_14250	0.44	-0.1
3,010,558	+		OLJFJH_14250	0.44	-1.6
3,010,558	+		OLJFJH_14250	0.44	-0.9
3,010,558	+		OLJFJH_14250	0.44	-0.2
3,010,558	+		OLJFJH_14250	0.44	-0.2
3,010,558	+		OLJFJH_14250	0.44	+1.8
3,010,559	-		OLJFJH_14250	0.45	+2.1
3,010,559	-		OLJFJH_14250	0.45	-2.3
3,010,559	-		OLJFJH_14250	0.45	+0.8
3,010,559	-		OLJFJH_14250	0.45	-1.1
3,010,559	-		OLJFJH_14250	0.45	-0.2
3,010,559	-		OLJFJH_14250	0.45	-0.6
3,010,559	-		OLJFJH_14250	0.45	-0.7
3,010,561	-		OLJFJH_14250	0.45	+0.2
3,010,561	-		OLJFJH_14250	0.45	-0.2
3,010,561	-		OLJFJH_14250	0.45	+0.0
3,010,561	-		OLJFJH_14250	0.45	+0.1
3,010,611	+		OLJFJH_14250	0.51	-0.3
3,010,611	+		OLJFJH_14250	0.51	-1.0
3,010,614	+		OLJFJH_14250	0.52	-0.8
3,010,614	+		OLJFJH_14250	0.52	-0.9
3,010,615	-		OLJFJH_14250	0.52	+0.4
3,010,617	+		OLJFJH_14250	0.52	-2.1
3,010,656	+		OLJFJH_14250	0.57	+0.2
3,010,657	-		OLJFJH_14250	0.58	+0.8
3,010,826	-		OLJFJH_14250	0.80	+0.2