Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS25595

Experiment: plant=Melon; plant sample=M4; plant location=P2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	plant=Melon; plant sample=M4; plant location=P2
47,029	-				+0.4
47,033	-				+0.5
47,162	+				+0.4
47,162	+				+0.5
47,162	+				+0.5
47,163	-				-0.2
47,163	-				-1.0
47,164	-				+0.8
47,196	+				-0.7
47,209	-				-0.8
47,216	-				-1.7
47,218	+				+1.0
47,219	-				-1.3
47,219	-				+0.3
47,240	-				+0.6
47,282	+				-0.7
47,307	-				-2.5
47,317	-				-0.5
47,419	+				-0.4
47,419	+				+3.8
47,500	-				+1.6
47,503	+				+0.3
47,540	+				+1.5
47,557	+				-1.9
47,589	-				+1.0
47,692	-				+0.4
47,692	-				+1.5
47,754	-				-0.5
47,777	-				-0.2
47,843	-				+0.4
47,845	+				+2.9
47,856	-				-0.7
47,859	+				-1.2
47,862	+				-0.2
47,882	+				-1.3
47,917	+				-1.5
49,407	-				-1.3
49,407	-				+0.5
49,422	-		LU632_RS25600	0.11	-0.2
49,457	+		LU632_RS25600	0.15	-0.3
49,458	-		LU632_RS25600	0.15	-1.2
49,458	-		LU632_RS25600	0.15	-0.4
49,476	+		LU632_RS25600	0.18	-0.7
49,514	+		LU632_RS25600	0.23	-1.3
49,515	-		LU632_RS25600	0.23	+0.3
49,516	+		LU632_RS25600	0.23	+0.7
49,530	+		LU632_RS25600	0.25	+0.0
49,532	+		LU632_RS25600	0.25	+0.0
49,681	-		LU632_RS25600	0.44	-1.7
49,683	-		LU632_RS25600	0.45	-0.2
49,753	+		LU632_RS25600	0.54	-0.4
49,848	+		LU632_RS25600	0.66	+1.2
49,964	+		LU632_RS25600	0.81	-0.6
50,042	+				+0.3
50,049	-				+0.0
50,052	+				+0.1
50,078	-				+0.0
50,080	+				-0.5
50,080	+				+1.1
50,080	+				-1.5
50,081	-				+1.4
50,148	+				+0.8
50,148	+				+0.8
50,149	-				-1.0
50,210	+				-1.3
50,218	-				-1.3