Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS23325

Experiment: plant=Melon; plant sample=M4; plant location=P2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	plant=Melon; plant sample=M4; plant location=P2
4,443,981	-		LU632_RS23320	0.65	-0.7
4,443,981	-		LU632_RS23320	0.65	-0.6
4,444,159	+		LU632_RS23320	0.86	-0.9
4,444,160	-		LU632_RS23320	0.86	-1.2
4,444,160	-		LU632_RS23320	0.86	-0.1
4,444,191	-		LU632_RS23320	0.90	-0.1
4,444,215	+				-1.9
4,444,215	+				-0.2
4,444,215	+				+0.3
4,444,215	+				+0.4
4,444,216	-				-2.1
4,444,216	-				-0.8
4,444,216	-				+0.7
4,444,216	-				-0.9
4,444,216	-				-0.8
4,444,216	-				-0.2
4,444,216	-				+1.6
4,444,216	-				+0.7
4,444,216	-				-1.7
4,444,216	-				+0.8
4,444,216	-				-0.9
4,444,216	-				+0.1
4,444,220	-				-1.4
4,444,263	-				+1.5
4,444,266	-				-0.5
4,444,806	+				-0.2
4,444,928	+		LU632_RS23325	0.25	-0.1
4,444,931	+		LU632_RS23325	0.26	+1.3
4,444,931	+		LU632_RS23325	0.26	-0.3
4,444,932	-		LU632_RS23325	0.27	-0.8
4,444,964	+		LU632_RS23325	0.44	-0.2
4,444,965	-		LU632_RS23325	0.44	-0.8
4,444,988	+		LU632_RS23325	0.57	+0.7
4,445,135	-				+1.9
4,445,353	-		LU632_RS23330	0.32	+1.1
4,445,658	+		LU632_RS23330	0.67	+0.1
4,445,658	+		LU632_RS23330	0.67	-0.0
4,445,685	+		LU632_RS23330	0.70	-1.9
4,445,685	+		LU632_RS23330	0.70	-0.6
4,445,752	-		LU632_RS23330	0.77	+0.5
4,445,955	-				+0.8
4,445,955	-				+0.5
4,446,027	+		LU632_RS23335	0.36	-0.5