Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS20875

Experiment: plant=Melon; plant sample=M4; plant location=P2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	plant=Melon; plant sample=M4; plant location=P2
3,987,453	+				-1.6
3,987,485	+				+3.2
3,987,527	-				+0.6
3,987,531	+				-0.4
3,987,531	+				-0.2
3,987,562	+				-0.8
3,987,582	+				-0.1
3,987,583	-				-1.7
3,987,635	-				-1.6
3,987,715	+				-1.6
3,987,719	+				-0.4
3,987,720	-				-1.0
3,987,720	-				-0.2
3,987,720	-				+0.3
3,987,985	+				-0.4
3,987,986	-				-0.8
3,987,986	-				-0.1
3,987,989	+				-0.8
3,989,154	+				-1.9
3,989,154	+				+0.6
3,989,154	+				+0.8
3,989,154	+				-0.4
3,989,186	-				-0.6
3,989,198	-				+0.9
3,989,204	-				-0.2
3,989,212	-		LU632_RS20880	0.10	-0.7
3,989,212	-		LU632_RS20880	0.10	+0.2
3,989,379	+		LU632_RS20880	0.38	-0.6
3,989,380	-		LU632_RS20880	0.39	-0.6
3,989,380	-		LU632_RS20880	0.39	-0.4
3,989,531	-		LU632_RS20880	0.64	-1.5
3,989,546	-		LU632_RS20880	0.67	-0.7
3,989,546	-		LU632_RS20880	0.67	+0.3
3,989,546	-		LU632_RS20880	0.67	-0.6
3,989,549	+		LU632_RS20880	0.67	+1.5
3,989,549	+		LU632_RS20880	0.67	+1.6
3,989,550	-		LU632_RS20880	0.68	+0.2
3,989,671	+		LU632_RS20880	0.88	-1.5
3,989,751	+				-1.6
3,989,752	-				-1.9
3,989,809	-				+0.9
3,990,010	+				-0.7
3,990,013	+				-0.4
3,990,013	+				-0.5
3,990,013	+				+1.5