Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS19930

Experiment: plant=Melon; plant sample=M4; plant location=P2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	plant=Melon; plant sample=M4; plant location=P2
3,789,901	-				+2.7
3,790,079	-	rseP	LU632_RS19930	0.13	-0.4
3,790,120	-	rseP	LU632_RS19930	0.16	-4.1
3,790,184	-	rseP	LU632_RS19930	0.21	-1.7
3,790,242	-	rseP	LU632_RS19930	0.25	-2.9
3,790,256	-	rseP	LU632_RS19930	0.26	-2.5
3,790,514	-	rseP	LU632_RS19930	0.46	-3.7
3,790,517	-	rseP	LU632_RS19930	0.46	-1.8
3,790,755	-	rseP	LU632_RS19930	0.63	-1.0
3,790,755	-	rseP	LU632_RS19930	0.63	-0.4
3,790,755	-	rseP	LU632_RS19930	0.63	-3.6
3,790,889	-	rseP	LU632_RS19930	0.73	+1.2
3,790,949	-	rseP	LU632_RS19930	0.78	+0.6
3,791,074	-	rseP	LU632_RS19930	0.87	-0.1
3,791,216	-				-2.3
3,791,244	-				-1.9