Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS19730

Experiment: plant=Melon; plant sample=M4; plant location=P2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	plant=Melon; plant sample=M4; plant location=P2
3,746,755	-		LU632_RS19720	0.73	+0.2
3,746,997	-				-1.4
3,747,136	+		LU632_RS19725	0.25	-0.4
3,747,245	-		LU632_RS19725	0.44	+1.2
3,747,282	+		LU632_RS19725	0.51	-1.1
3,747,355	+		LU632_RS19725	0.64	+1.6
3,747,355	+		LU632_RS19725	0.64	+0.4
3,747,355	+		LU632_RS19725	0.64	-2.1
3,747,355	+		LU632_RS19725	0.64	-0.4
3,747,393	-		LU632_RS19725	0.70	+1.0
3,747,393	-		LU632_RS19725	0.70	+0.3
3,747,537	+				-0.5
3,747,537	+				-0.6
3,747,611	+				+0.4
3,747,613	+				-0.7
3,747,613	+				+0.4
3,747,613	+				-0.0
3,747,627	+				+1.5
3,748,644	-				+0.7
3,748,650	-				+1.9
3,748,689	+				+0.5
3,748,713	+				+1.0
3,748,713	+				-0.4
3,748,714	-				-1.2
3,748,714	-				-0.2
3,748,793	-				+0.2
3,748,947	+				-0.1
3,749,107	-				-0.2
3,749,128	+				+0.2
3,749,133	-				+0.1
3,749,214	+	mqo	LU632_RS19735	0.12	+0.9
3,749,241	-	mqo	LU632_RS19735	0.14	+0.4
3,749,254	+	mqo	LU632_RS19735	0.15	-1.4
3,749,255	-	mqo	LU632_RS19735	0.15	+0.6
3,749,255	-	mqo	LU632_RS19735	0.15	-0.4
3,749,304	+	mqo	LU632_RS19735	0.18	-0.2