Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS19435
Experiment: plant=Melon; plant sample=M4; plant location=P2
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | plant=Melon; plant sample=M4; plant location=P2 |
---|---|---|---|---|---|
remove | |||||
3,680,047 | - | +0.6 | |||
3,680,061 | - | +0.6 | |||
3,680,799 | + | -0.6 | |||
3,680,937 | - | +0.6 | |||
3,680,950 | - | +1.0 | |||
3,680,951 | + | -0.3 | |||
3,680,951 | + | -0.3 | |||
3,680,952 | - | -0.1 | |||
3,680,952 | - | +0.6 | |||
3,680,953 | + | +0.5 | |||
3,680,954 | - | +1.8 | |||
3,680,954 | - | +0.2 | |||
3,681,009 | - | +0.2 | |||
3,681,056 | - | +0.4 | |||
3,681,056 | - | -0.2 | |||
3,681,058 | - | +1.2 | |||
3,681,276 | + | LU632_RS19440 | 0.24 | -0.7 |
Or see this region's nucleotide sequence