Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS19120

Experiment: plant=Melon; plant sample=M4; plant location=P2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	plant=Melon; plant sample=M4; plant location=P2
3,606,574	+				-1.2
3,606,695	+				+2.3
3,606,879	+				-0.4
3,607,030	+		LU632_RS19115	0.30	-0.2
3,607,031	-		LU632_RS19115	0.30	+0.4
3,607,064	+		LU632_RS19115	0.39	-2.4
3,607,064	+		LU632_RS19115	0.39	-0.2
3,607,065	-		LU632_RS19115	0.39	+0.2
3,607,065	-		LU632_RS19115	0.39	+0.2
3,607,065	-		LU632_RS19115	0.39	+0.4
3,607,066	+		LU632_RS19115	0.40	-0.3
3,607,066	+		LU632_RS19115	0.40	-1.3
3,607,066	+		LU632_RS19115	0.40	+0.2
3,607,067	-		LU632_RS19115	0.40	-1.2
3,607,068	+		LU632_RS19115	0.40	-1.4
3,607,069	-		LU632_RS19115	0.40	-0.8
3,607,069	-		LU632_RS19115	0.40	-1.6
3,607,118	-		LU632_RS19115	0.53	-0.7
3,607,118	-		LU632_RS19115	0.53	+1.3
3,607,118	-		LU632_RS19115	0.53	-1.0
3,607,130	+		LU632_RS19115	0.57	+1.8
3,607,131	-		LU632_RS19115	0.57	+0.3
3,607,141	-		LU632_RS19115	0.60	+0.8
3,607,147	-		LU632_RS19115	0.61	+0.6
3,607,372	+				+1.3
3,607,440	+				-0.6
3,607,572	-		LU632_RS19120	0.31	-0.8
3,607,575	-		LU632_RS19120	0.32	+1.9
3,607,659	+		LU632_RS19120	0.69	-1.2
3,607,659	+		LU632_RS19120	0.69	+2.7
3,607,659	+		LU632_RS19120	0.69	-1.3
3,607,660	-		LU632_RS19120	0.70	-0.2
3,607,695	-		LU632_RS19120	0.85	-0.4
3,607,695	-		LU632_RS19120	0.85	-0.4
3,607,710	+				+0.0
3,607,858	-				+3.2
3,607,912	+				+0.9