Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS19060

Experiment: plant=Melon; plant sample=M4; plant location=P2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	plant=Melon; plant sample=M4; plant location=P2
3,597,269	+		LU632_RS19050	0.74	+0.5
3,597,269	+		LU632_RS19050	0.74	+0.2
3,597,290	+		LU632_RS19050	0.77	+0.7
3,597,290	+		LU632_RS19050	0.77	+0.2
3,597,290	+		LU632_RS19050	0.77	-1.1
3,597,331	+		LU632_RS19050	0.81	-0.8
3,597,331	+		LU632_RS19050	0.81	+0.6
3,597,332	-		LU632_RS19050	0.81	+1.5
3,597,332	-		LU632_RS19050	0.81	+1.6
3,597,332	-		LU632_RS19050	0.81	+0.4
3,597,332	-		LU632_RS19050	0.81	-1.0
3,597,332	-		LU632_RS19050	0.81	+0.8
3,597,392	-		LU632_RS19050	0.88	-0.4
3,597,556	+		LU632_RS19055	0.10	-0.8
3,597,557	-		LU632_RS19055	0.10	+1.6
3,597,735	+		LU632_RS19055	0.37	-0.2
3,597,736	-		LU632_RS19055	0.37	+1.5
3,597,736	-		LU632_RS19055	0.37	+0.9
3,598,104	+				+1.2
3,598,105	+				+2.2
3,598,105	+				+0.3
3,598,106	-				+1.2
3,598,291	+		LU632_RS19060	0.34	+1.1
3,598,292	-		LU632_RS19060	0.35	-1.4
3,598,304	+		LU632_RS19060	0.41	+1.2
3,598,305	-		LU632_RS19060	0.42	-0.4
3,598,337	+		LU632_RS19060	0.58	-1.7
3,598,448	-				-0.2
3,598,466	-				-0.1
3,598,466	-				+1.0
3,598,503	-				-0.1
3,598,508	-				+0.2
3,598,573	+		LU632_RS19065	0.17	-1.5
3,598,615	-		LU632_RS19065	0.29	-0.4
3,598,704	-		LU632_RS19065	0.54	-2.1
3,598,704	-		LU632_RS19065	0.54	-1.5
3,598,717	+		LU632_RS19065	0.57	-1.8
3,598,739	-		LU632_RS19065	0.63	+0.6
3,598,739	-		LU632_RS19065	0.63	-0.4
3,598,749	+		LU632_RS19065	0.66	-1.1
3,598,777	+		LU632_RS19065	0.74	-1.1
3,598,778	-		LU632_RS19065	0.74	-0.1
3,598,832	-		LU632_RS19065	0.89	+1.2
3,598,847	+				+0.8
3,598,848	-				+1.3
3,598,848	-				+0.2
3,598,848	-				-0.8
3,598,848	-				+0.4
3,598,887	+				-1.8
3,598,888	-				-0.1
3,598,893	+				-3.1
3,598,894	-				+1.2
3,598,973	-				-0.8
3,599,027	-				-2.7
3,599,029	+				+0.4
3,599,030	-				-0.7
3,599,030	-				-0.7
3,599,030	-				+1.7
3,599,033	-				-1.6
3,599,033	-				-1.1
3,599,094	+				+0.0
3,599,109	+				-1.0
3,599,111	+				-2.6
3,599,114	-				-1.3
3,599,131	-				-1.6
3,599,165	+				-1.4
3,599,307	-				-0.9
3,599,350	-				+1.4
3,599,350	-				+0.3
3,599,350	-				+0.2
3,599,416	-				-1.0