Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS18920

Experiment: plant=Melon; plant sample=M4; plant location=P2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	plant=Melon; plant sample=M4; plant location=P2
3,568,719	-				+0.8
3,568,745	+				-0.3
3,568,759	+				+0.8
3,568,760	-				-0.2
3,568,776	+				-1.4
3,568,776	+				+0.0
3,568,777	-				-0.5
3,568,824	-				+1.8
3,568,848	+				-0.7
3,568,848	+				-0.7
3,568,873	+				-0.4
3,568,893	-				+0.2
3,568,897	-				+0.2
3,568,901	+				-0.7
3,568,936	-				-2.0
3,568,937	-				-2.3
3,568,961	-				-2.3
3,568,977	-				-0.2
3,569,019	-				-1.0
3,569,019	-				-0.2
3,569,044	+				-0.5
3,569,059	+				-1.1
3,569,227	+				-1.0
3,569,228	-				-0.9
3,569,228	-				+0.1
3,569,228	-				+2.6
3,569,270	+				-1.3
3,569,301	+				+0.1
3,569,301	+				+0.7
3,569,309	-				-0.9
3,569,316	-				+1.0
3,569,323	-				-1.7
3,569,337	-				-0.1
3,569,337	-				-1.6
3,569,477	+				-1.6
3,569,481	+				+0.8
3,569,562	+				-1.5
3,569,569	-				-0.5
3,569,634	-				+0.1
3,569,638	+				-0.4
3,569,639	-				+0.8
3,569,725	-	phoR	LU632_RS18920	0.16	-0.9
3,569,759	-	phoR	LU632_RS18920	0.18	-0.5
3,569,841	-	phoR	LU632_RS18920	0.25	-0.5
3,569,898	+	phoR	LU632_RS18920	0.29	+0.4
3,569,898	+	phoR	LU632_RS18920	0.29	-0.5
3,569,899	-	phoR	LU632_RS18920	0.29	+0.5
3,570,088	-	phoR	LU632_RS18920	0.44	+0.9
3,570,261	-	phoR	LU632_RS18920	0.57	+1.1
3,570,451	-	phoR	LU632_RS18920	0.72	+0.5
3,570,463	-	phoR	LU632_RS18920	0.73	+2.7
3,570,564	+	phoR	LU632_RS18920	0.80	+0.7
3,570,633	+	phoR	LU632_RS18920	0.86	-0.5
3,570,675	+	phoR	LU632_RS18920	0.89	-0.7
3,570,675	+	phoR	LU632_RS18920	0.89	+0.1
3,570,827	-				-0.8
3,570,925	-	phoB	LU632_RS18925	0.12	+1.1
3,570,939	+	phoB	LU632_RS18925	0.14	+0.8
3,570,940	-	phoB	LU632_RS18925	0.14	-0.6
3,570,968	+	phoB	LU632_RS18925	0.18	+0.9
3,570,985	+	phoB	LU632_RS18925	0.20	+0.0
3,570,986	-	phoB	LU632_RS18925	0.21	-0.5
3,570,986	-	phoB	LU632_RS18925	0.21	-0.4
3,570,986	-	phoB	LU632_RS18925	0.21	+0.1
3,570,993	+	phoB	LU632_RS18925	0.22	-0.4
3,571,013	+	phoB	LU632_RS18925	0.24	-1.2
3,571,013	+	phoB	LU632_RS18925	0.24	+0.3
3,571,014	-	phoB	LU632_RS18925	0.25	-1.6
3,571,053	+	phoB	LU632_RS18925	0.30	-0.2
3,571,053	+	phoB	LU632_RS18925	0.30	+0.1
3,571,054	-	phoB	LU632_RS18925	0.30	+1.1
3,571,054	-	phoB	LU632_RS18925	0.30	+1.6
3,571,055	+	phoB	LU632_RS18925	0.31	+0.5
3,571,056	-	phoB	LU632_RS18925	0.31	+0.8
3,571,056	-	phoB	LU632_RS18925	0.31	-0.3
3,571,168	-	phoB	LU632_RS18925	0.47	+0.1
3,571,221	+	phoB	LU632_RS18925	0.55	+0.5
3,571,221	+	phoB	LU632_RS18925	0.55	-1.6
3,571,229	+	phoB	LU632_RS18925	0.56	-0.6
3,571,229	+	phoB	LU632_RS18925	0.56	-0.2
3,571,229	+	phoB	LU632_RS18925	0.56	+0.0
3,571,230	-	phoB	LU632_RS18925	0.56	+0.8
3,571,230	-	phoB	LU632_RS18925	0.56	-0.1
3,571,305	+	phoB	LU632_RS18925	0.67	+0.4
3,571,338	+	phoB	LU632_RS18925	0.72	+2.5
3,571,338	+	phoB	LU632_RS18925	0.72	+0.5
3,571,338	+	phoB	LU632_RS18925	0.72	+0.5
3,571,521	+				-1.2
3,571,535	-				-0.5
3,571,583	+				+0.4
3,571,584	-				+1.8
3,571,698	+				+0.4
3,571,699	-				-1.4
3,571,781	+				+0.1