Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS16510

Experiment: plant=Melon; plant sample=M4; plant location=P2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	plant=Melon; plant sample=M4; plant location=P2
3,127,670	+		LU632_RS16505	0.61	-0.3
3,127,670	+		LU632_RS16505	0.61	-2.5
3,127,671	-		LU632_RS16505	0.61	-0.8
3,128,111	+				+1.8
3,128,111	+				+0.9
3,128,229	-				-0.3
3,128,340	+				-0.5
3,128,402	+				+0.1
3,128,485	-				-0.6
3,128,488	+				+0.2
3,128,552	+				+2.0
3,128,585	+		LU632_RS16510	0.19	+0.0
3,128,585	+		LU632_RS16510	0.19	-2.1
3,128,677	-		LU632_RS16510	0.58	-0.3
3,128,710	-		LU632_RS16510	0.72	+0.0
3,128,790	-				+0.7
3,128,952	+				-0.5
3,129,150	-				+0.7
3,129,188	+				-2.0
3,129,189	-				+1.0
3,129,189	-				-2.2
3,129,189	-				-1.4
3,129,189	-				+1.7
3,129,281	+				-1.1
3,129,434	-				+0.9
3,129,438	+				+1.0
3,129,439	-				+0.3
3,129,439	-				-1.7
3,129,439	-				-2.0
3,129,442	+				-1.6
3,129,442	+				+0.2
3,129,443	-				-0.2
3,129,443	-				-0.5
3,129,537	+				+0.0
3,129,538	-				+0.4
3,129,562	+				-0.6
3,129,562	+				-2.2
3,129,567	+				-1.1
3,129,568	-				-0.9
3,129,572	-				+2.9
3,129,595	+				-0.6
3,129,615	-				+0.1