Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS16060

Experiment: plant=Melon; plant sample=M4; plant location=P2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	plant=Melon; plant sample=M4; plant location=P2
3,032,483	-	ybgC	LU632_RS16050	0.28	+0.2
3,032,487	-	ybgC	LU632_RS16050	0.29	+0.6
3,032,489	-	ybgC	LU632_RS16050	0.30	+0.6
3,032,489	-	ybgC	LU632_RS16050	0.30	+0.3
3,032,525	-	ybgC	LU632_RS16050	0.39	-2.2
3,032,525	-	ybgC	LU632_RS16050	0.39	+1.0
3,032,525	-	ybgC	LU632_RS16050	0.39	-0.6
3,032,666	-	ybgC	LU632_RS16050	0.73	+0.4
3,032,692	-	ybgC	LU632_RS16050	0.80	-1.6
3,032,692	-	ybgC	LU632_RS16050	0.80	+1.4
3,032,737	-				+0.4
3,032,777	-				-0.3
3,032,777	-				+0.4
3,032,806	-				-0.6
3,032,855	+				-1.3
3,032,985	+				-0.8
3,033,016	-				+0.0
3,033,055	+				+1.4
3,033,055	+				+0.5
3,033,164	+				-0.2
3,033,164	+				+0.1
3,033,165	-				-0.4
3,033,165	-				-0.8
3,033,221	-				+0.8