Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS15480

Experiment: plant=Melon; plant sample=M4; plant location=P2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	plant=Melon; plant sample=M4; plant location=P2
2,935,395	+		LU632_RS15470	0.73	-0.0
2,935,452	+		LU632_RS15470	0.76	-1.1
2,935,485	+		LU632_RS15470	0.78	-1.0
2,935,686	-				-2.0
2,935,834	+				-1.8
2,935,849	+				-0.5
2,935,849	+				-1.5
2,935,849	+				+0.7
2,935,849	+				-0.3
2,935,850	-				+0.5
2,935,913	-		LU632_RS15475	0.12	-0.1
2,936,015	+		LU632_RS15475	0.31	-1.5
2,936,016	-		LU632_RS15475	0.31	-0.9
2,936,106	+		LU632_RS15475	0.48	-1.0
2,936,376	+				-0.6
2,936,805	+		LU632_RS15480	0.60	-1.0
2,936,806	-		LU632_RS15480	0.60	-0.1
2,936,893	-		LU632_RS15480	0.72	-1.9
2,936,971	+		LU632_RS15480	0.83	+1.1
2,937,230	-				-1.3
2,937,238	+		LU632_RS15485	0.10	+1.7
2,937,242	-		LU632_RS15485	0.11	-0.0
2,937,280	+		LU632_RS15485	0.13	-2.0
2,937,603	+		LU632_RS15485	0.35	+1.2
2,937,603	+		LU632_RS15485	0.35	+0.6
2,937,604	-		LU632_RS15485	0.35	-0.1
2,937,604	-		LU632_RS15485	0.35	+0.2
2,937,604	-		LU632_RS15485	0.35	-1.6
2,937,604	-		LU632_RS15485	0.35	-0.3
2,937,605	+		LU632_RS15485	0.35	-0.3
2,937,606	-		LU632_RS15485	0.35	-0.2
2,937,606	-		LU632_RS15485	0.35	+2.0
2,937,606	-		LU632_RS15485	0.35	+0.2
2,937,606	-		LU632_RS15485	0.35	-1.7
2,937,828	+		LU632_RS15485	0.50	-0.6
2,937,828	+		LU632_RS15485	0.50	+0.2
2,937,829	-		LU632_RS15485	0.50	-0.2
2,937,859	+		LU632_RS15485	0.52	+1.0
2,937,904	+		LU632_RS15485	0.55	-0.5
2,937,998	-		LU632_RS15485	0.62	+2.6
2,938,065	+		LU632_RS15485	0.66	+1.0
2,938,065	+		LU632_RS15485	0.66	-0.6
2,938,065	+		LU632_RS15485	0.66	+1.1
2,938,065	+		LU632_RS15485	0.66	+2.0
2,938,066	-		LU632_RS15485	0.66	-1.0