Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS15200

Experiment: plant=Melon; plant sample=M4; plant location=P2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	plant=Melon; plant sample=M4; plant location=P2
2,875,940	+				-0.9
2,875,966	-				-1.3
2,876,890	-				-0.6
2,877,008	+	ybcJ	LU632_RS15200	0.46	+1.0
2,877,008	+	ybcJ	LU632_RS15200	0.46	-2.2
2,877,086	-	ybcJ	LU632_RS15200	0.83	-1.0
2,877,114	-				-1.0
2,877,142	+				-0.2
2,877,142	+				-0.1
2,877,142	+				-1.3
2,877,143	-				+1.3
2,877,336	-				+0.3
2,877,343	+				+0.3
2,877,440	-				-0.3