Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS14225

Experiment: plant=Melon; plant sample=M4; plant location=P2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	plant=Melon; plant sample=M4; plant location=P2
2,726,203	+		LU632_RS14220	0.47	+0.3
2,726,203	+		LU632_RS14220	0.47	-0.6
2,726,203	+		LU632_RS14220	0.47	+0.0
2,726,347	+		LU632_RS14220	0.69	-0.5
2,726,348	-		LU632_RS14220	0.69	-0.7
2,726,348	-		LU632_RS14220	0.69	-2.7
2,726,440	+		LU632_RS14220	0.83	+0.1
2,726,444	+		LU632_RS14220	0.84	+1.1
2,726,445	-		LU632_RS14220	0.84	-0.2
2,726,475	-		LU632_RS14220	0.89	+2.5
2,726,482	+		LU632_RS14220	0.90	-1.7
2,726,576	+				-0.1
2,726,576	+				-0.5
2,726,576	+				-0.1
2,726,859	-				+1.4
2,726,907	+				-0.0
2,726,910	-				-0.6
2,726,910	-				+3.4
2,726,910	-				-0.0
2,726,910	-				+0.3
2,726,910	-				-0.9
2,726,910	-				+2.4
2,726,910	-				-0.9
2,727,169	-		LU632_RS14225	0.40	-0.3
2,728,243	-		LU632_RS14235	0.84	-1.7
2,728,584	+		LU632_RS14240	0.40	-0.7
2,728,584	+		LU632_RS14240	0.40	-1.1