Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS14165

Experiment: plant=Melon; plant sample=M4; plant location=P2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	plant=Melon; plant sample=M4; plant location=P2
2,713,645	-		LU632_RS14155	0.44	+0.8
2,713,645	-		LU632_RS14155	0.44	-0.2
2,713,653	-		LU632_RS14155	0.46	-0.6
2,713,676	-		LU632_RS14155	0.50	+3.4
2,713,688	+		LU632_RS14155	0.52	-0.6
2,713,688	+		LU632_RS14155	0.52	-1.8
2,713,688	+		LU632_RS14155	0.52	-1.1
2,713,689	-		LU632_RS14155	0.52	-1.0
2,713,765	+		LU632_RS14155	0.65	-0.0
2,713,765	+		LU632_RS14155	0.65	+0.6
2,713,766	-		LU632_RS14155	0.65	-0.9
2,713,807	+		LU632_RS14155	0.72	-1.5
2,713,861	+		LU632_RS14155	0.81	-1.7
2,713,862	-		LU632_RS14155	0.81	+1.0
2,713,862	-		LU632_RS14155	0.81	-2.6
2,713,863	+		LU632_RS14155	0.81	-1.5
2,713,864	-		LU632_RS14155	0.81	-0.3
2,713,953	-				-1.5
2,713,987	+				+0.6
2,714,129	+				+0.4
2,714,129	+				-0.6
2,714,129	+				+0.0
2,714,162	+				+0.5
2,714,191	+				+0.3
2,714,195	-				+0.3
2,714,323	-		LU632_RS14160	0.11	-0.4
2,714,335	-		LU632_RS14160	0.26	+0.1
2,714,619	+				-0.4
2,714,626	+				+3.3
2,714,626	+				-1.8
2,714,642	+				-0.5
2,714,643	-				-0.1
2,714,677	-				+0.6
2,714,724	-		LU632_RS14165	0.13	+0.0
2,715,078	+		LU632_RS14165	0.42	-1.1
2,715,078	+		LU632_RS14165	0.42	-0.1
2,716,394	-		LU632_RS14170	0.19	-0.0
2,716,436	-		LU632_RS14170	0.21	+0.3
2,716,439	-		LU632_RS14170	0.21	+1.7