Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS13705

Experiment: plant=Melon; plant sample=M4; plant location=P2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	plant=Melon; plant sample=M4; plant location=P2
2,615,500	+				+0.3
2,615,528	+				-1.2
2,615,539	+				-1.0
2,615,608	+				-0.4
2,615,609	-				+3.2
2,615,639	+				-0.2
2,615,639	+				-1.5
2,615,687	-				+0.3
2,615,687	-				+0.7
2,615,699	-				+1.1
2,615,699	-				-0.6
2,615,699	-				-0.9
2,615,708	+				-0.5
2,615,708	+				+0.8
2,615,709	-				-0.3
2,615,710	+				+1.1
2,615,760	-				-0.5
2,615,819	+				-1.3
2,615,820	-				+1.8
2,615,826	-				-1.0
2,615,826	-				+1.2
2,615,826	-				-1.4
2,615,826	-				-0.4
2,615,874	+				-1.1
2,615,932	-				+1.0
2,615,932	-				-0.4
2,616,332	+		LU632_RS13705	0.42	-0.7
2,616,366	-		LU632_RS13705	0.45	-0.9
2,616,413	-		LU632_RS13705	0.49	+0.2
2,616,413	-		LU632_RS13705	0.49	-1.4
2,616,418	-		LU632_RS13705	0.49	-0.7
2,616,439	+		LU632_RS13705	0.51	+1.5
2,616,439	+		LU632_RS13705	0.51	-0.7
2,616,502	+		LU632_RS13705	0.56	-1.3
2,616,633	-		LU632_RS13705	0.67	-0.7
2,616,661	+		LU632_RS13705	0.70	-0.4
2,616,661	+		LU632_RS13705	0.70	-2.2
2,616,661	+		LU632_RS13705	0.70	-0.2
2,616,662	-		LU632_RS13705	0.70	-1.2
2,616,662	-		LU632_RS13705	0.70	-0.1
2,616,735	+		LU632_RS13705	0.76	+0.4
2,616,817	-		LU632_RS13705	0.83	-2.0
2,616,892	+		LU632_RS13705	0.89	+0.5
2,616,892	+		LU632_RS13705	0.89	+0.2
2,616,892	+		LU632_RS13705	0.89	-1.7
2,616,892	+		LU632_RS13705	0.89	+0.3
2,616,893	-		LU632_RS13705	0.89	-0.7
2,616,893	-		LU632_RS13705	0.89	-0.1
2,616,893	-		LU632_RS13705	0.89	+0.3
2,616,893	-		LU632_RS13705	0.89	+1.5
2,616,945	+				-1.7
2,616,946	-				-0.5
2,616,946	-				-0.7
2,616,990	+				+0.0
2,617,027	-				-1.3
2,617,065	+				+0.4
2,617,076	+				-2.1
2,617,076	+				-0.8
2,617,096	-				+1.1
2,617,220	+				+0.3
2,617,228	+				+0.0
2,617,228	+				+0.1
2,617,228	+				-1.0
2,617,274	+				-0.4
2,617,274	+				-0.2
2,617,274	+				-2.0
2,617,274	+				-0.3
2,617,313	+				-0.2
2,617,353	+				-0.7
2,617,353	+				+0.0
2,617,354	-				-2.4
2,617,355	+				+1.8
2,617,356	-				-0.8
2,617,356	-				-1.5
2,617,356	-				+0.4
2,617,390	-				-0.5
2,617,535	+				-0.7
2,617,616	-				-1.3