Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS13145

Experiment: plant=Melon; plant sample=M4; plant location=P2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	plant=Melon; plant sample=M4; plant location=P2
2,507,970	-				+0.7
2,507,970	-				-1.0
2,507,971	+				-2.4
2,507,971	+				+0.6
2,507,971	+				-0.6
2,507,971	+				+0.2
2,507,971	+				-0.4
2,507,972	-				+0.0
2,507,972	-				-0.5
2,507,972	-				+0.2
2,507,972	-				-0.1
2,507,972	-				-0.1
2,507,972	-				+0.3
2,507,974	-				+0.6
2,508,031	+				-0.0
2,508,041	+				-0.3
2,508,041	+				+0.9
2,508,041	+				-0.5
2,508,059	-				-0.4
2,508,062	+				-1.3
2,508,063	-				+0.3
2,508,063	-				-1.1
2,508,093	+				-1.0
2,508,103	-				+0.9
2,508,140	-				-0.0
2,508,143	+				-1.3
2,508,144	-				-0.1
2,508,176	-				-0.7
2,508,219	+				-0.5
2,508,450	+		LU632_RS13140	0.33	-1.3
2,508,450	+		LU632_RS13140	0.33	+2.1
2,508,699	+		LU632_RS13140	0.75	-1.9
2,508,700	-		LU632_RS13140	0.75	+1.3
2,508,729	-		LU632_RS13140	0.80	-0.3
2,508,835	+				-0.5
2,508,836	-				-0.6
2,508,850	+				-2.5
2,508,893	+				-0.7
2,508,894	-				+0.3
2,508,901	+				+0.4
2,508,991	+				-1.2
2,508,992	-				-2.3
2,509,844	+				+0.6
2,509,845	-				+2.3
2,509,846	+				+0.3
2,509,846	+				-1.5
2,509,847	-				-1.5
2,509,880	+				-1.7
2,509,880	+				-1.0
2,509,906	+				+0.3
2,509,906	+				+1.1
2,509,906	+				+0.0
2,509,907	+				-2.5
2,509,907	-				+1.5
2,510,013	-		LU632_RS13150	0.15	-0.3
2,510,036	+		LU632_RS13150	0.16	-0.8
2,510,037	-		LU632_RS13150	0.17	-2.0
2,510,262	-		LU632_RS13150	0.28	-1.1
2,510,262	-		LU632_RS13150	0.28	+1.1
2,510,329	-		LU632_RS13150	0.32	+0.4
2,510,525	+		LU632_RS13150	0.42	+1.5
2,510,557	-		LU632_RS13150	0.44	+0.9