Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS13055

Experiment: plant=Melon; plant sample=M4; plant location=P2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	plant=Melon; plant sample=M4; plant location=P2
2,490,451	+		LU632_RS13045	0.86	+0.3
2,490,451	+		LU632_RS13045	0.86	+1.4
2,490,452	-		LU632_RS13045	0.86	+0.6
2,490,601	-				+0.4
2,490,601	-				+1.8
2,490,716	-				-0.3
2,490,719	-				+0.8
2,490,751	+				+1.8
2,490,780	+				+0.5
2,490,819	-		LU632_RS13050	0.14	-0.2
2,490,874	+		LU632_RS13050	0.40	-0.5
2,490,881	+		LU632_RS13050	0.43	-1.4
2,490,882	-		LU632_RS13050	0.44	-1.3
2,490,915	+		LU632_RS13050	0.60	+1.8
2,491,175	+				+0.8
2,491,793	-		LU632_RS13055	0.57	-0.5
2,491,793	-		LU632_RS13055	0.57	+0.3
2,491,908	+		LU632_RS13055	0.66	-1.7
2,492,038	+		LU632_RS13055	0.78	+0.8
2,492,042	+		LU632_RS13055	0.78	+0.8
2,492,897	+				+0.8
2,492,906	+				+2.4
2,492,909	+				-0.8
2,492,915	+				+1.8
2,492,923	-				+0.3